Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1111 |
Symbol | |
ID | 1219924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1167685 |
End bp | 1168785 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637237478 |
Product | hypothetical protein |
Protein accession | NP_519232 |
Protein GI | 17545830 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00425236 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.240927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAG CGCAAAAGCA GTGGGCGGCC GAGGGCGGAC TCCGGTGGGA CGGGCGCATG TTGGCCGGCG CAGGCCTCCT GGCGGGCTGC GCCGGCGTGG CGATGATCGC GGGCGCGACG GCATGGGCCG GCCACCTGGG CCTGAGCGCG TTGACGCTCG CCATCCTGCT GGGCATGGCG ATCGGCCACG TGCCGGGCCA CCAGCGCTGG CTGACCGCGG GCACCATCCA GTTCGCGCGG CACACGCTGC TGCGCGCCGG CGTGGTGCTG TACGGCGCGC GGCTCACGCT CGCGCAGGTA CACGATCTCG GCGCGAGCGG CGTGGTGATT CCACTGCTGG TGCTGGCGGC AACCATGCTC TCGGGCGCGT GGGTCGGCAC GCGTGTCTTC GGCCTGTCTC GGTCGCAGGC GGTGCTCGTG GCGGCGGGTA GCGCGGTGTG CGGCGCGGCG GCGGTGCTGG CCGTGGCGCC GGCGGTGAAG GCCTCGCCGC GCGAGACGGC GGTCGCGATC GCCAGCGTGG TGCTGTTCGG CACCGCCGGC ATCTTCCTCT ATCCGTGGCT GTACGCGCTG GCGATGCATG CCGGCGTGGC CGTGGCGCCC GCGCATTTCG GGGTCTACAT CGGTTCGACG CTGCACGAGG TGGCGCAGGT GATCGCCGCC GCGCGTCCGC TGGGCGATGA CGCGGCCAAT GCCGCCGTGG TCAGCAAGAT GGTGCGGGTC CTGGCGCTGG CGCCGTTGCT GGTGGTGCTC GCCTGCACGA TGCCGGCAGA AGGGCTGGTT TTGGAGGCGG GTTCGGGCGA AGGCGCGCTG CGCAGGGCGA CCGGTCACGC GTGGCGTGCG ATGCCGTGGT TTGCGGCCGG TCTGTTGGGT GTGGCGCTGC TCAATTCCGG CGGCGCCATC CCCGCCACGT GGCACGCGCC GATCGACGCG ATCGATACCG GCATGCTGGC CTGCGCGATG TTCGCCATCG GCACGCAGAC GCATGTGCCG ATGCTGCTCA AGTCCGGCGT GCGTCCGCTG CTGTGCGCGG GGGTGCTGTG GGTCGGGCTG GTTGCGGGCG GTGCGGCGAT CAACGCCGGG GTGCGCTGGC TGGCGGGCTG A
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Protein sequence | MTTAQKQWAA EGGLRWDGRM LAGAGLLAGC AGVAMIAGAT AWAGHLGLSA LTLAILLGMA IGHVPGHQRW LTAGTIQFAR HTLLRAGVVL YGARLTLAQV HDLGASGVVI PLLVLAATML SGAWVGTRVF GLSRSQAVLV AAGSAVCGAA AVLAVAPAVK ASPRETAVAI ASVVLFGTAG IFLYPWLYAL AMHAGVAVAP AHFGVYIGST LHEVAQVIAA ARPLGDDAAN AAVVSKMVRV LALAPLLVVL ACTMPAEGLV LEAGSGEGAL RRATGHAWRA MPWFAAGLLG VALLNSGGAI PATWHAPIDA IDTGMLACAM FAIGTQTHVP MLLKSGVRPL LCAGVLWVGL VAGGAAINAG VRWLAG
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