| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1098 |
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| Symbol | |
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| ID | 1219910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1155665 |
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| End bp | 1156747 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237464 |
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| Product | transcriptional regulatory DNA-binding transcription regulator protein |
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| Protein accession | NP_519219 |
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| Protein GI | 17545817 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCG ACGTACCCGC TTTGCCCCGC GCCGAATCGA TGCCCGAACG CATCCGTTTC
GGCATCGTGC TACTGCCGAA CTTCACGCTG ACGGCGTTCT CGGGGTTCGT CGACATGCTG
CGGCTGTCCG CCGATGACGG CGACTACAGC AAGCCGGTGC GCTGCGCGTG GAGTGTGATC
GGTGAGACGC TGGCACCGGT GCGTGCAAGC TGCGGCATCC AGATCACGCC GTGGGAAACC
TTTGACGAGG CACAGCCGTT CGACTACGTG GTCGTTGTCG GCGGGCTGCT GCACTCAGGG
CCGCAGGCGG GGCCCGAAAC GCTCGACTTC ATCCGCCGCA CGGCCGCCGA CGGCGCAACG
GTCGTCGGCA TCTGTACCGG CGTGTTCACG CTGATGCGCG CGGGGGTGCT GGAGGGGCAC
CGCACCTGCG TGAGCTGGTT CCACTATTGG GATTTCATCG AGCGCTTTCC CGCAGCCGAT
CCGGACCTGT TGATCGCCGA CCGCCTGTTC GTGATCGACC GGCGCAGGAT CACGTGCTCG
GGCGGGCGCG CATCGATCGA CGTCGCCGCG GCGATCCTGC TACGCCACTT CGACCACGCA
ACCGTGCAGA AGGCGCTGCG CATCCTGCTC GTTGGCGAGA TGCAGAAAGG GAACGCACCG
CAGCCGCATC CACCAGGCCT GGAGCCCGCG ACACACCCGA AGGTCAAGCG CGCGATTCTG
CTGATGGAAC AGCATGTGGG GGGCGCGCTG CCGCTCAAGG CGCTCGCCTG CAAGCTCGAC
ATGTCGACTC GGCAGCTCGA ACGGCTGTTC AAGGCCGAGA CCGGCAGAAG CCCGCAGGCG
TTCGCGAAAC ACGTGCGGCT CGGCACCGCC GCGTGGCTGC TGACGAGTTC CGATCGGACG
GTTGCCGACA TCGCGCTGAG CTGCGGCTTC GCCGACGCGT CGCACCTCGG CCGCGAATTT
CGCAAGCAGT TTGGCGTGCC ACCCGCCACT TACCGCGAGC AGGGCGCGCA TGCAGACGCG
CCGGTATTAC CCGACGGTGC CGACGCCCGA TCGGAAAGCG ATGAACGCCC CGCTCGCGCC
TGA
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| Protein sequence | MTSDVPALPR AESMPERIRF GIVLLPNFTL TAFSGFVDML RLSADDGDYS KPVRCAWSVI
GETLAPVRAS CGIQITPWET FDEAQPFDYV VVVGGLLHSG PQAGPETLDF IRRTAADGAT
VVGICTGVFT LMRAGVLEGH RTCVSWFHYW DFIERFPAAD PDLLIADRLF VIDRRRITCS
GGRASIDVAA AILLRHFDHA TVQKALRILL VGEMQKGNAP QPHPPGLEPA THPKVKRAIL
LMEQHVGGAL PLKALACKLD MSTRQLERLF KAETGRSPQA FAKHVRLGTA AWLLTSSDRT
VADIALSCGF ADASHLGREF RKQFGVPPAT YREQGAHADA PVLPDGADAR SESDERPARA
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