Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1070 |
Symbol | |
ID | 1219879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1122173 |
End bp | 1123363 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237433 |
Product | hypothetical protein |
Protein accession | NP_519191 |
Protein GI | 17545789 |
COG category | [S] Function unknown |
COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000120552 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.185672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACC TCTCGTCCTG GGACCTCTTC TGCCGCGTCG TCGACAACTA CGGCGACATC GGCGTGTGCT GGCGCCTGGC CCGGCAACTG GTCCAGGAGC ACGGCCATAC GGTGCGGCTG TGGGTGGACG ACCTGCGCGC ATTCGAACGG CTGTGCCCGG CGGTCGACAC GGCCGCCGCT GCGCAGCGCG TCTCGGGCGT GGACATCCGC CGCTGGAGCG ACGACGCCGG CGTCGCGGCG CTGCTGGCCG CGGATGCGCA TGCCGCGCCG CATGACGTGG TGGTCGAAGC CTTCGCCTGC GACATCCCCG AGCCCATGCT GCAGCGCATG GCCGACGCTG CCCGCCAAGG CCGGGCGCCG ATCTGGATCA ACCTCGAATA TTTGAGCGCG GAAGACTGGG TGGCCACGCA CCACGCGATG CAGTCGCCGC ATCCACGGCT GCCGCTGGTC AAGCACTTCT TCTTTCCCGG CATGGCGCGC GGCACGGGCG GCGTGCTGCG CGAAGCTCAG TTGGGCGCGC AGCGGGCGGC ATTCGAAGCC AGCCCGACGG CACACCGGAC GCTTTGGCAC CGGCTGGGCG TGGACGACCT GATGCAGCAC GCGCCCGACG CGCTGCGCGT GAGCCTGTTC GCTTACCCCA ACCCCGCCCT GCCTTCGCTG ATCGCGCAAT GGGCGGCATC TGCCCGCCCG GTGATCTGCC TGGCCCCCGA AGGACTGGCG GCGGCGCAGA TCGCGGAACA GTTCGGCGCA ACCGCCCCCG CAGCCGGCGC GCGCTGGACA CAGGGCCCCC TGAGCGTTGC CGTGGTGCCC TTCGTGCCGC AAGAGCACTA CGATGCACTG CTGTGGGCCT GCGACGTCAA CTTCGTCCGG GGCGAGGATT CCTTCGTGCG CGCCCAGTGG GCGCTGCGCC CGTTCGTCTG GCACATCTAC CCGCAAAGCG ACGACGCCCA CCTCGCCAAG CTGGACGCCT TTCTGGCCCG CTATGCCCCC GCCCTGCCGC AGGCGGCGGC CGATGCGCTC GCCACCTTCT GGCATGCCTG GAACGCGCAG CCCACCTCAC TCGACTGGCC TGCGTTCGCC GCCGCCCTGG CACCGCTGCG CGACCGCGCC GCCACGTGGG AACACACGCT GTTGTGTCTG GGCGATCTCG CGGCGAATCT GGTGGCGTTC TGCGAAAAAC AGGTAAAATA G
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Protein sequence | MRNLSSWDLF CRVVDNYGDI GVCWRLARQL VQEHGHTVRL WVDDLRAFER LCPAVDTAAA AQRVSGVDIR RWSDDAGVAA LLAADAHAAP HDVVVEAFAC DIPEPMLQRM ADAARQGRAP IWINLEYLSA EDWVATHHAM QSPHPRLPLV KHFFFPGMAR GTGGVLREAQ LGAQRAAFEA SPTAHRTLWH RLGVDDLMQH APDALRVSLF AYPNPALPSL IAQWAASARP VICLAPEGLA AAQIAEQFGA TAPAAGARWT QGPLSVAVVP FVPQEHYDAL LWACDVNFVR GEDSFVRAQW ALRPFVWHIY PQSDDAHLAK LDAFLARYAP ALPQAAADAL ATFWHAWNAQ PTSLDWPAFA AALAPLRDRA ATWEHTLLCL GDLAANLVAF CEKQVK
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