Gene RSc1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1061 
SymbollepB 
ID1219870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1115188 
End bp1116105 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID637237424 
Productsignal peptidase I 
Protein accessionNP_519182 
Protein GI17545780 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.582864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.298061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG CCCTGATCCT TTTCATTCTC GTCGTCTTCA CCGGTGTGGC GTGGGTGGCC 
GACAAGCTGA TGTTCCAGCG CCAACGCCAG GCCGCCGCCA CGGCCGCGCT GGCCGAGTTC
GACGCCCGTG CCCAGGCCCA GGTGCAGTAT GGTGCCGTGG CCGACGTGGG CGCGGCGCGC
GCGCAGCTGG CCGAAGAGAC GCTGCGCATG CCCTGGTGGC TGGAATACAC GGCCAGTTTC
TTCCCGGTGA TCGCCGCGGT GTTCCTGCTG CGTTCGTTCG TGGTGGAGCC GTTCAAGATC
CCGTCGGGCT CGATGATCCC GACGCTGCAG ATCGGTGATT TCATCCTCGT CAACAAGTAC
ACCTACGGCG TGCGCCTGCC GATCGTCAAC AAGAAGCTCG TCGAGCTGAA TCAGCCGCAA
CGCGGCGATG TGATGGTCTT CCGCTACCCG AAAGACGAGT CGATGGACTA CATCAAGCGC
GTGATCGGGG TGCCGGGCGA CGTGGTGAAG TACGACAACA AGCGCCTGAC GATCAACGGC
CAGCCTGCCA TCTACGCGCC GCAGCAGGAC TACATGTACG TGGAAGACAC CGGGGACGCG
CAACATCCGC GCATCACGTA TTCCAAGCAG TACCAGGAAA CGCTCGGCAG CGTTGCGCAC
AACATCCTCA ACGATAACGA CCGCCCGGCC TATGTGTCCG GTCCGGACGA TTTTCCGTTC
CGCGAGAACT GCACTTACAA TCAGACCGGC TTTACCTGCA AGGTACCTGC AGGTCACTAT
TTCATGATGG GCGATAATCG CGACAACAGC GCGGATTCCC GCTACTGGGG CTTCGTGCCG
GACAAAAACA TCGTCGGGAA AGCGTTCTTC ATCTGGATGA ATCTGGGCGA CTGGAAGCGG
ATCGGCAGCT TCCATTGA
 
Protein sequence
MNFALILFIL VVFTGVAWVA DKLMFQRQRQ AAATAALAEF DARAQAQVQY GAVADVGAAR 
AQLAEETLRM PWWLEYTASF FPVIAAVFLL RSFVVEPFKI PSGSMIPTLQ IGDFILVNKY
TYGVRLPIVN KKLVELNQPQ RGDVMVFRYP KDESMDYIKR VIGVPGDVVK YDNKRLTING
QPAIYAPQQD YMYVEDTGDA QHPRITYSKQ YQETLGSVAH NILNDNDRPA YVSGPDDFPF
RENCTYNQTG FTCKVPAGHY FMMGDNRDNS ADSRYWGFVP DKNIVGKAFF IWMNLGDWKR
IGSFH