Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1061 |
Symbol | lepB |
ID | 1219870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1115188 |
End bp | 1116105 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637237424 |
Product | signal peptidase I |
Protein accession | NP_519182 |
Protein GI | 17545780 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.582864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.298061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTCG CCCTGATCCT TTTCATTCTC GTCGTCTTCA CCGGTGTGGC GTGGGTGGCC GACAAGCTGA TGTTCCAGCG CCAACGCCAG GCCGCCGCCA CGGCCGCGCT GGCCGAGTTC GACGCCCGTG CCCAGGCCCA GGTGCAGTAT GGTGCCGTGG CCGACGTGGG CGCGGCGCGC GCGCAGCTGG CCGAAGAGAC GCTGCGCATG CCCTGGTGGC TGGAATACAC GGCCAGTTTC TTCCCGGTGA TCGCCGCGGT GTTCCTGCTG CGTTCGTTCG TGGTGGAGCC GTTCAAGATC CCGTCGGGCT CGATGATCCC GACGCTGCAG ATCGGTGATT TCATCCTCGT CAACAAGTAC ACCTACGGCG TGCGCCTGCC GATCGTCAAC AAGAAGCTCG TCGAGCTGAA TCAGCCGCAA CGCGGCGATG TGATGGTCTT CCGCTACCCG AAAGACGAGT CGATGGACTA CATCAAGCGC GTGATCGGGG TGCCGGGCGA CGTGGTGAAG TACGACAACA AGCGCCTGAC GATCAACGGC CAGCCTGCCA TCTACGCGCC GCAGCAGGAC TACATGTACG TGGAAGACAC CGGGGACGCG CAACATCCGC GCATCACGTA TTCCAAGCAG TACCAGGAAA CGCTCGGCAG CGTTGCGCAC AACATCCTCA ACGATAACGA CCGCCCGGCC TATGTGTCCG GTCCGGACGA TTTTCCGTTC CGCGAGAACT GCACTTACAA TCAGACCGGC TTTACCTGCA AGGTACCTGC AGGTCACTAT TTCATGATGG GCGATAATCG CGACAACAGC GCGGATTCCC GCTACTGGGG CTTCGTGCCG GACAAAAACA TCGTCGGGAA AGCGTTCTTC ATCTGGATGA ATCTGGGCGA CTGGAAGCGG ATCGGCAGCT TCCATTGA
|
Protein sequence | MNFALILFIL VVFTGVAWVA DKLMFQRQRQ AAATAALAEF DARAQAQVQY GAVADVGAAR AQLAEETLRM PWWLEYTASF FPVIAAVFLL RSFVVEPFKI PSGSMIPTLQ IGDFILVNKY TYGVRLPIVN KKLVELNQPQ RGDVMVFRYP KDESMDYIKR VIGVPGDVVK YDNKRLTING QPAIYAPQQD YMYVEDTGDA QHPRITYSKQ YQETLGSVAH NILNDNDRPA YVSGPDDFPF RENCTYNQTG FTCKVPAGHY FMMGDNRDNS ADSRYWGFVP DKNIVGKAFF IWMNLGDWKR IGSFH
|
| |