| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1044 |
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| Symbol | |
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| ID | 1219853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1098911 |
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| End bp | 1100047 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237407 |
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| Product | putative protease transmembrane protein |
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| Protein accession | NP_519165 |
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| Protein GI | 17545763 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.163907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CGACCCCGCC GAAATCGCCG GAAGAAGGCG CCGGCAAGCC CGATGAACTG
GAATTCACGC ACCAGGCGGA CCATCCGCTG GAGGCCGAGC TGCGAGATGC CGCTGCCGGC
AAGCCGGCGT CCAGGCCCGG TCTGTTCGGC CGCTTCCGAC ATGGCGAGAG CGGCGCGCCG
CGCGCATCGG GCGCCCCCGC CGGCTGGGAG CGCGACGTAC TCGAGCGCGT CCTCCTGGCG
GCGATCCGCG AGCAGCGCGC CGCCCGCCGC TGGCGCATCT TTTTCCGCTT CGTGACGCTG
GGCATCATCG GCGGGCTGCT GTATCTGTTC GCCAGCTTCG AGGGCGAGAC CGTCAGCTCC
GGCCGCCACA CCGCGCTGGT GACGCTCGAT GGCGAGATCG CCGCCAACAC CAACGCCAGC
GCCGACAACA TCAACGCCTC GCTGGAAGCC GCGTTCGCCG ACGACAACAC CGCCGGGGTG
ATCCTCAAGA TCAACTCGCC GGGCGGCTCG CCGGTGCAGG CCGGCATGAT CAACGACGAC
ATCCGCCGCC TGCGCGCCAA GTACAAGAAC ATCCCGCTGT ATGTGGTGGT CGAGGAGATG
TGCGCCTCGG GCGGCTACTA CGTGGCCGCC GCCGCCGACA AGATCTATGT CGACAAGGCC
AGCATCGTCG GCTCGATCGG CGTGCTGATG GACGGCTTCG GCTTCACCGG CCTGATGGAC
AAGCTGGGTG TGGAGCGGCG TCTGCTGACG GCCGGTACCA ACAAGGGCAT GCTCGACCCG
TTCTCGCCGG TGGCCCCGCA GCAGCGGCAA TTCGCCCAGG CGATGCTCGA CGAGGTGCAC
CAGCAGTTCA TCGATGTGGT CAAGCAGGGG CGCGGCAGCC GCCTGAAGGA CGATCCGCAG
CTGTTCTCCG GCCTGTTCTG GACCGGTGCC AAGGCGGTCG ATCTGGGCTT GGCGGACGGC
ATCGGCGGCA CCGATTTCGT CGCCCGCAAC ATCATCAAGG CGCCGGACTT GGTCGACTAC
ACGGTCAAGG AGAACTTCGC CGAGCGCGTG GCACGCAAGT TCGGCACGGC CATGGGCGCA
GGGGCCATCA AGGCGCTGGC CGCGACCGGC CAGCTCAAGC TCCTGATGAG GCAGTAG
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| Protein sequence | MTDPTPPKSP EEGAGKPDEL EFTHQADHPL EAELRDAAAG KPASRPGLFG RFRHGESGAP
RASGAPAGWE RDVLERVLLA AIREQRAARR WRIFFRFVTL GIIGGLLYLF ASFEGETVSS
GRHTALVTLD GEIAANTNAS ADNINASLEA AFADDNTAGV ILKINSPGGS PVQAGMINDD
IRRLRAKYKN IPLYVVVEEM CASGGYYVAA AADKIYVDKA SIVGSIGVLM DGFGFTGLMD
KLGVERRLLT AGTNKGMLDP FSPVAPQQRQ FAQAMLDEVH QQFIDVVKQG RGSRLKDDPQ
LFSGLFWTGA KAVDLGLADG IGGTDFVARN IIKAPDLVDY TVKENFAERV ARKFGTAMGA
GAIKALAATG QLKLLMRQ
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