| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1017 |
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| Symbol | |
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| ID | 1219826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1070954 |
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| End bp | 1071913 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237380 |
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| Product | sugar-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_519138 |
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| Protein GI | 17545736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.353153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.189775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCA GCCGACGCCG CGCCCTGCGA CTCAGCGCGG GCTCCGCACT CGCCCTTGCC
TTGCCCTTTC CGTTCGCCGC GTCGCGTGCC GCCAACCGGC CGCCCAAGAT CGCGCTGGTG
ATGAAATCGC TGGCCAACGA GTTCTTCCTG ACCATGGAGA ACGGGGCGCG GGCCCACCAG
AAGACGCACG CATCGGAATA CACGCTGCTG GCCAACGGCA TCCGCGACGA AACCGACACC
GGCGGGCAGA TCCGCCTGAT CGAGCAGATG ATCGTGGCGC GCGTCGATGC GCTGGTGCTG
GCGCCGGCCG ACTCGAAGGC GCTGGTGCCG GTGGTCAGGA AGGCGGTCGA TGCAGGCATC
CTGGTCGTCA ACATCGACAA CCGGCTCGAC CCGGAAACGC TCAGAGACAA GGGCCTGAAC
GTGCCGTTCG TCGGCCCCGA CAACCGCAAG GGCGCACGCC TGGTGGGCGA GTTCGTCGCC
AAGTCGCTCA AGCCGGGCGA TGCGATCGGC ATCATCGAGG GCATCCCGAC CACCACCAAC
GCCCAGCAGC GCACGGCGGG CTTCCGGGAT GCCGCGCAGG GCGCGGGGCT CAGAATCGTC
AGCGTGCAAT CGGGCGAGTG GGAAATCGAC AAGGGCAACA AGGTGGCCGC CGCGATGCTG
CGCGCCCAGC CCGACATCAA GGCCCTGCTG TGCGGCAACG ACAACATGGC GATCGGCGCG
GTATCGGCCG TGCGCGCCGC GGGCAAGACC GGCAGGGTCC TGATCGGCGG CTATGACGAC
ATTGCCGCCA TCAAGGCCAT GCTGGCCGAC GGCCGCGTCG CGGCGACCGC CGACCAGCAC
GCCGGCCAGC AAGCGGTGTA CGGCATCCAG ACCGCGCTCA AGGCCCTAGC GGCGAAAACA
CCGCAGGCGC AGCTGGGCGG GGTGATCGAA ACACCGGTCA ACCTGGTCAC CCGCACCTGA
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| Protein sequence | MDSSRRRALR LSAGSALALA LPFPFAASRA ANRPPKIALV MKSLANEFFL TMENGARAHQ
KTHASEYTLL ANGIRDETDT GGQIRLIEQM IVARVDALVL APADSKALVP VVRKAVDAGI
LVVNIDNRLD PETLRDKGLN VPFVGPDNRK GARLVGEFVA KSLKPGDAIG IIEGIPTTTN
AQQRTAGFRD AAQGAGLRIV SVQSGEWEID KGNKVAAAML RAQPDIKALL CGNDNMAIGA
VSAVRAAGKT GRVLIGGYDD IAAIKAMLAD GRVAATADQH AGQQAVYGIQ TALKALAAKT
PQAQLGGVIE TPVNLVTRT
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