Gene RSc1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1014 
Symbol 
ID1219823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1067248 
End bp1068291 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID637237377 
Producttranscriptional regulatory DNA-binding repressor transcription regulator protein 
Protein accessionNP_519135 
Protein GI17545733 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.302245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTA TCAAGGACGT TGCCGCATTA GCCGGGGTGT CATTCACCAC CGTCTCGCAT 
GTCATCAACA ACACACGGCC GGTCAACTCG GAAACGCGCA AGCGCGTGGA AGAGGCCATC
CGCGCCACGC GCTATGTACC CAGCGCCGTA GCACGCTCGC TCAAGCACCG CACCACGCGC
ACCATCGGCG TGCTGGTGCC GACCGCCACC AACCCCTACT TCGCCGAACT GGCGCGCGGC
ATCGAAGACG TGTGCGCCGC GGCCGGCTAC AGCGTCATCC TGTGCAACTC CGATGACGAT
CCCCGCAAGC AGCGCGACTA CCTGCGCGTG CTGATGGAGA AGCGCGTCGA CGGCCTCATC
GTCAGCAGCG CCGGACCGGA CAACGCGCTG CTCGATGCAC TGGGCGAATC CGCGCTGCCC
GTGGTGATGG TGGACCGTCC CACCGAGGGC ATCCTGGCCG ACCAGGTGCA GATCGACCAT
GAGGAAGGCG CCTACCTGGC GACCCGGCAT CTGCTCGAGC TCGGGCACCG CCGCATTGCC
TGCATCAGCG GACCGTCGAC GCTGAGCGTG ACCGCCGGGC GGCTGGCGGG CTTTCACCGG
GCGCTGCGCG AAGCCGGCGT GCCCGAGCAC GCCGCGCGCG TGGCCGAAGG CGACTTCACC
AGCCCCGGCG GCTACCGCGC CGCGCGCGAA CTGCTGACCA CCGGCGAGAC GCCCACCGCC
ATCTTCGCCA GCAACGACCT GATGGGCATC GGCGCGCTGC GTGCGGCCGC CGAGCTGGGC
ATCGCGGTGC CGAAGGAACT GTCCATCATC GGCTTCGACG ACATCGAGCT GAGCCGCTAT
GTCTATCCGG CGCTGTCCAC GGTGGGCCAG TCGATCCGGC AACTGGGCGA GACCACGGCC
TCAACCCTGC TCGAGCACCT GACCGATCAC GCCGCGCGGC ATCACCACGA GATCCCCGAC
GCGCCGCGCC GCATCGTGCT GCCGCCGCGC CTGTCGCTGC GCGAGTCGAC CGCCGAGCCC
GCACGCCCCG CGCGCGCGGC CTAA
 
Protein sequence
MATIKDVAAL AGVSFTTVSH VINNTRPVNS ETRKRVEEAI RATRYVPSAV ARSLKHRTTR 
TIGVLVPTAT NPYFAELARG IEDVCAAAGY SVILCNSDDD PRKQRDYLRV LMEKRVDGLI
VSSAGPDNAL LDALGESALP VVMVDRPTEG ILADQVQIDH EEGAYLATRH LLELGHRRIA
CISGPSTLSV TAGRLAGFHR ALREAGVPEH AARVAEGDFT SPGGYRAARE LLTTGETPTA
IFASNDLMGI GALRAAAELG IAVPKELSII GFDDIELSRY VYPALSTVGQ SIRQLGETTA
STLLEHLTDH AARHHHEIPD APRRIVLPPR LSLRESTAEP ARPARAA