Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1014 |
Symbol | |
ID | 1219823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1067248 |
End bp | 1068291 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237377 |
Product | transcriptional regulatory DNA-binding repressor transcription regulator protein |
Protein accession | NP_519135 |
Protein GI | 17545733 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.106948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.302245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTA TCAAGGACGT TGCCGCATTA GCCGGGGTGT CATTCACCAC CGTCTCGCAT GTCATCAACA ACACACGGCC GGTCAACTCG GAAACGCGCA AGCGCGTGGA AGAGGCCATC CGCGCCACGC GCTATGTACC CAGCGCCGTA GCACGCTCGC TCAAGCACCG CACCACGCGC ACCATCGGCG TGCTGGTGCC GACCGCCACC AACCCCTACT TCGCCGAACT GGCGCGCGGC ATCGAAGACG TGTGCGCCGC GGCCGGCTAC AGCGTCATCC TGTGCAACTC CGATGACGAT CCCCGCAAGC AGCGCGACTA CCTGCGCGTG CTGATGGAGA AGCGCGTCGA CGGCCTCATC GTCAGCAGCG CCGGACCGGA CAACGCGCTG CTCGATGCAC TGGGCGAATC CGCGCTGCCC GTGGTGATGG TGGACCGTCC CACCGAGGGC ATCCTGGCCG ACCAGGTGCA GATCGACCAT GAGGAAGGCG CCTACCTGGC GACCCGGCAT CTGCTCGAGC TCGGGCACCG CCGCATTGCC TGCATCAGCG GACCGTCGAC GCTGAGCGTG ACCGCCGGGC GGCTGGCGGG CTTTCACCGG GCGCTGCGCG AAGCCGGCGT GCCCGAGCAC GCCGCGCGCG TGGCCGAAGG CGACTTCACC AGCCCCGGCG GCTACCGCGC CGCGCGCGAA CTGCTGACCA CCGGCGAGAC GCCCACCGCC ATCTTCGCCA GCAACGACCT GATGGGCATC GGCGCGCTGC GTGCGGCCGC CGAGCTGGGC ATCGCGGTGC CGAAGGAACT GTCCATCATC GGCTTCGACG ACATCGAGCT GAGCCGCTAT GTCTATCCGG CGCTGTCCAC GGTGGGCCAG TCGATCCGGC AACTGGGCGA GACCACGGCC TCAACCCTGC TCGAGCACCT GACCGATCAC GCCGCGCGGC ATCACCACGA GATCCCCGAC GCGCCGCGCC GCATCGTGCT GCCGCCGCGC CTGTCGCTGC GCGAGTCGAC CGCCGAGCCC GCACGCCCCG CGCGCGCGGC CTAA
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Protein sequence | MATIKDVAAL AGVSFTTVSH VINNTRPVNS ETRKRVEEAI RATRYVPSAV ARSLKHRTTR TIGVLVPTAT NPYFAELARG IEDVCAAAGY SVILCNSDDD PRKQRDYLRV LMEKRVDGLI VSSAGPDNAL LDALGESALP VVMVDRPTEG ILADQVQIDH EEGAYLATRH LLELGHRRIA CISGPSTLSV TAGRLAGFHR ALREAGVPEH AARVAEGDFT SPGGYRAARE LLTTGETPTA IFASNDLMGI GALRAAAELG IAVPKELSII GFDDIELSRY VYPALSTVGQ SIRQLGETTA STLLEHLTDH AARHHHEIPD APRRIVLPPR LSLRESTAEP ARPARAA
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