Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0991 |
Symbol | |
ID | 1219800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1043279 |
End bp | 1043779 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237354 |
Product | hypothetical protein |
Protein accession | NP_519112 |
Protein GI | 17545710 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.229474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG CCTTGCCCGA CCTGCAGCGC GGACTGGCGC CGATCCTCGA TGCCGAGGTT CGCGTGCTGG TGCTCGGCAG CTTTCCGGGC GAGGCTTCAT TGGCGGCGCA GCAGTACTAC GCTCATCCGC GCAACCAGTT CTGGCCGCTG ATGGGTGCGC TGCTCGACCT GCCGCTGCCC GCCATGCCGT ATGCGGCGCG CGTGCGGGCG CTGCTGGCCC GCCACATCGG CGTGTGGGAT GTGCTGGGCG CCTGCGTGCG CGAAGGCAGT CTCGATGCGG CGATCCGCCA TCCGCAGGCC AACGATTTCG ACCTGCTGCA CCGGCGGGCG CCGAGGCTGC GGCGGGTGGG CTTCAATGGC GGCACGGCGG GCAGGTTCGC CAAGGATTTC GCCCGCGCCG GCTTCGAGAC GGTGGTGCTG CCGTCGTCCA GCCCGGCGCA CGCGGCGCGC TCGTTCGAGC AGAAGCTTGC GCTGTGGCGC TCGCTGTTGC CGGACGACTA G
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Protein sequence | MAEALPDLQR GLAPILDAEV RVLVLGSFPG EASLAAQQYY AHPRNQFWPL MGALLDLPLP AMPYAARVRA LLARHIGVWD VLGACVREGS LDAAIRHPQA NDFDLLHRRA PRLRRVGFNG GTAGRFAKDF ARAGFETVVL PSSSPAHAAR SFEQKLALWR SLLPDD
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