| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0975 |
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| Symbol | |
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| ID | 1219784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1022803 |
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| End bp | 1024713 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237338 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519096 |
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| Protein GI | 17545694 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000424481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.109741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGT TTTCCATTAC CGATGCGCAA TTGGCCTTTG GCCATGTGGC GCTGCTCGAC
CACACCGATT TTTCGCTGGA GGCCGGCGAG CGCGTCGGCC TGATCGGCCG CAACGGCACC
GGCAAGTCCT CGCTGCTCAA GATCGTGGCT GGCCAGACGG CGCCCGACGA TGGGCTGATC
GCGCGCCAGA GCGGCGTCAT CTCCGCCTAC GTGCCGCAGG AGCCGGTGTT CGATCCGGAC
CAGACCGTGG CCGAGGCGGT CGCCATGGGC GTGCCGCAGG CCGCCGCGCT GCTGGCCGAA
TACGAAGCGC TGGTCACCTC GATGGGCGAA TCGCACGACG AGGCCGCATT GCAGCGGCTG
CACGCGCTGC AGGCGCAGCT GGAGGCCGCG GACGCCTGGC AGCTGCGCAC GCGTGTGGAG
ACCACCATCG CCCAGCTCGG CCTGACGCCC GGCGTGCGCA TCGGCGCGCT GTCGGGTGGC
CTCACCAAGC GCGTGGCGCT CGCGCAGGCG CTGGTCGGCG CGCCCGACAT CCTGATGCTG
GACGAGCCGA CCAACCACCT CGACTACGAT TCGATCCGCT GGCTCGAAGA CCTGCTGCTG
GCCTTTCGCG GCAGCGTGCT GTTCATCACG CACGACCGGG CGTTCCTGGA CCGCGTCGCC
ACGCGCATCG TCGAGCTCGA CCGCGGCAAG CTGCGCTCGT ATCCCGGCAA CTTCTCCGCC
TACCAGGCGC GCAAGGCGCA GCAGCTCGAG GCCGAGGCGC TGGAGAACGC GCGCTTCGAC
AAGCTGCTCG CGCAGGAAGA GGTCTGGATC CGCAAGGGCG TGGAAGCGCG CCGCACCCGC
AGCGTAGGCC GCGTGGCCCG GCTCGTGCAG ATGCGCGAGG AGCACGCCGC GCGCCGCGAG
GTGCAGGGCA ACGTCAAGCT GGAGGTGTCG CAGGGCGACC GCTCCGGCAA GATCGTCGCC
GAGCTGGTCG ATGTGGCCAA GCATTATGGC GACAAGGCCG TGGTGCGCGA TTTCTCCGCC
ACCATCCTGC GCGGCGACAA GGTCGGCCTG CTGGGCCCGA ACGGTGTCGG CAAGACCACG
CTGCTCAAGC TGATCCTGGG CGAGCTGGCG CCGGATGCGG GCACGGTGCG CAACGGCACC
AACCTGCAGG TGGCGTATTT CGACCAGATG CGCGCGCAGC TCGACCTGAA CCGCTCGCTG
GCCGATACCA TCAGCCCGGG CAGCGACTGG ATCGACATCA ACGGCCAGCG CAAGCACGTG
ATGAGCTACC TGGGCGATTT CCTCTTTCCG CCCGAGCGGG CGCGCTCGCC GGTGGCGTCG
CTCTCGGGCG GCGAGCGCAA CCGGCTGCTG CTGGCGCGCC TGTTCGCGCG GCCGGCCAAT
GCGCTGGTGC TCGATGAGCC GACCAACGAT CTCGACATCG ACACGCTGGA GCTGCTCGAA
GAGCTGCTGC AGGAATACAG CGGCACCGTG TTCCTGGTTT CGCACGACCG TGCTTTCGTC
GACAACGTCG TCACCTCGGT GATCGCGGCC GAGGGCGACG GCGTGTGGCG CGAATACGTG
GGCGGGTTCT CCGACTGGCA GACGCAGTCG GCGCGCTCGG CGCGGCTCGC GCAGGTCGCC
AGGCCGGTCG CCGAAGAGAA GAAGGCTGAG CCGGTGCGTC CGCGCGAGCG GGCCACCGTC
AAGCTGTCGT ACAAGGAGCA GCGCGAGCTG GATGCGCTGC CGGCCAGGAT CGAGGCGCTG
GAGGCTGAGC AGAAGGCCGT GGGCGCCGAG CTGGAAGACG GCACGATCTA CGGGCGCGAT
CCGCAGCGCG CGCAGCAGCT GGCCGAGCGG CACGAGGCGA TCGAGCTCGA GCTGCTGGAA
GTGCTGGAGC GCTGGGAAAC GCTGGAAAGC AAGCGCGCCG GCACGGCCTG A
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| Protein sequence | MALFSITDAQ LAFGHVALLD HTDFSLEAGE RVGLIGRNGT GKSSLLKIVA GQTAPDDGLI
ARQSGVISAY VPQEPVFDPD QTVAEAVAMG VPQAAALLAE YEALVTSMGE SHDEAALQRL
HALQAQLEAA DAWQLRTRVE TTIAQLGLTP GVRIGALSGG LTKRVALAQA LVGAPDILML
DEPTNHLDYD SIRWLEDLLL AFRGSVLFIT HDRAFLDRVA TRIVELDRGK LRSYPGNFSA
YQARKAQQLE AEALENARFD KLLAQEEVWI RKGVEARRTR SVGRVARLVQ MREEHAARRE
VQGNVKLEVS QGDRSGKIVA ELVDVAKHYG DKAVVRDFSA TILRGDKVGL LGPNGVGKTT
LLKLILGELA PDAGTVRNGT NLQVAYFDQM RAQLDLNRSL ADTISPGSDW IDINGQRKHV
MSYLGDFLFP PERARSPVAS LSGGERNRLL LARLFARPAN ALVLDEPTND LDIDTLELLE
ELLQEYSGTV FLVSHDRAFV DNVVTSVIAA EGDGVWREYV GGFSDWQTQS ARSARLAQVA
RPVAEEKKAE PVRPRERATV KLSYKEQREL DALPARIEAL EAEQKAVGAE LEDGTIYGRD
PQRAQQLAER HEAIELELLE VLERWETLES KRAGTA
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