| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0927 |
|---|
| Symbol | lrp |
|---|
| ID | 1219735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 979581 |
|---|
| End bp | 980078 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637237289 |
|---|
| Product | leucine-responsive regulatory DNA-binding transcription regulator protein |
|---|
| Protein accession | NP_519048 |
|---|
| Protein GI | 17545646 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.276629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCC AGCGAAAACC CGTGCGCGCC CTCGACAAGC TCGACCGGCG CATCCTCGAC
CTGCTGCAGA AGGACGGCCG GCTGTCCATG AAGGAGCTGT CCGACGCGGT CGGTCTGACC
ATCACGCCCT GCATCGAGCG GGTCAAGCGG CTGGAGCGGG AGCGCTTCAT CCTCGGCTAC
TACGCGCGGC TGAATCCGGC CATGCTCGGC GCATCGCTGC TCGTGTTCGT GGAGATCAGC
CTGGGTAGCA AGTCCGGCAA CATGTTCGAG CAGTTCCGGC GCGAGGTCCT GCGCATTTCC
GAGGTGCTGG AGTGCCACCT CGTCTCCGGC GATTTCGACT ACCTCATCAA GGCGCGCATC
CGCGAGATGA GCGAGTACCG GCGCCTGCTC GGCGACATCC TGCTGCAGCT GCCGGGCGCG
GTGCAGTCCA AGAGCTACAT CGTGATGGAA GAGATCAAGG AGACGCTTGC CATCGACGCG
ATCGGCGAAG ACGCGTAG
|
|---|
| Protein sequence | MRTQRKPVRA LDKLDRRILD LLQKDGRLSM KELSDAVGLT ITPCIERVKR LERERFILGY
YARLNPAMLG ASLLVFVEIS LGSKSGNMFE QFRREVLRIS EVLECHLVSG DFDYLIKARI
REMSEYRRLL GDILLQLPGA VQSKSYIVME EIKETLAIDA IGEDA
|
|---|
| |