Gene RSc0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0918 
SymbolmltB 
ID1219726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp969474 
End bp970592 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID637237280 
Productputative membrane-bound lytic murein transglycosylase B protein 
Protein accessionNP_519039 
Protein GI17545637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.841841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGA GCCAAACGTC CCCCTCCCGT CGTCCCGTGC TGCGCGCCCT GATGGCGGGT 
GCCGCACTCT CCACGCTTTC CCTGTCTTCG CTGTCGCTGG CCGCGCGCGC TGCCAGACGC
CGCGTCGCCG TGCACGAGGA GGAGATCGAC CCGGACCGCT ATCGCAACAA TCCGCAGACG
CAAGCCTTCA TCGGCACGCT GGTGGCCGAA CACAACTTCG ACCGCGCCGC GCTCGACGCG
CTGTTTGCCG GCACCGCTTA TTCCGCCACG GTGGCGCGGT TGATCCTGCC GCCGCCGACG
CCGGCGCGCC GCAGCTGGAC GGCCTACCGC GGCCGCTTCA TCGAGCCGGT GCGGATCGGC
GCCGGCGTGG AATTCTGGCA GCAATACGGC GACACACTGC GCCGGGCCGA AGCCGAGTTC
GGCGTGCCGG CCGACGTGGT CGTCGGCATC CTCGGCGTGG AGACGATCTA CGGCCGCGAC
ATGGGCAACT TCCGCGTGAT GGATGCGCTC ACCACGCTCG CCTTCGACTA CCCGGACACG
CCCAACCGCG AAGAGCGCAG CACCATGTTC CGCAACCAGC TGAAGGACTT CCTGCTGTGG
TGCCGCGACA CCGGGACGGA TGCCTTCTCG GTGCTGGGCT CGTACGCCGG CGCGGTCGGC
ATTCCGCAGT TCATGCCGGC CAGCATCCGC GAATATGCCC TCGACTACGA CCGCGACGGA
CGCATCGACC TGCGCAACAG CGCGGTGGAC GCCATCGGCA GCGTCGCGCA CTTCCTGCAG
ATGCATGGTT GGGAGCCCAA CCGCCCGGTG ATGTGGAACA TCGCGGGCGA CACCGACAGC
CAGGGCATCG CGGCGGCGGC AGCCGATGGC CAGCCCTATC CACGCATGAC GCTGTCCCGG
CTGACGCGCG CCGGGCTGGC CCTGGCCCCC GGCGTCGACA CCGCCCGCGA GCAGGAGACC
GATGTGCTCG TGGTCGACCT GCCCTCCCCC GGCCTGCCAA CCGAATACCG CGTCGGCCTG
CGCAATTTCT ATGTGCTGAC GCGCTACAAC CGCAGCTTCT TCTACGCCGC CGCGGTGTAC
GAGCTGGGCC AGGCGGTCCG CCAGGCCATG CGGGGCTGA
 
Protein sequence
MPMSQTSPSR RPVLRALMAG AALSTLSLSS LSLAARAARR RVAVHEEEID PDRYRNNPQT 
QAFIGTLVAE HNFDRAALDA LFAGTAYSAT VARLILPPPT PARRSWTAYR GRFIEPVRIG
AGVEFWQQYG DTLRRAEAEF GVPADVVVGI LGVETIYGRD MGNFRVMDAL TTLAFDYPDT
PNREERSTMF RNQLKDFLLW CRDTGTDAFS VLGSYAGAVG IPQFMPASIR EYALDYDRDG
RIDLRNSAVD AIGSVAHFLQ MHGWEPNRPV MWNIAGDTDS QGIAAAAADG QPYPRMTLSR
LTRAGLALAP GVDTAREQET DVLVVDLPSP GLPTEYRVGL RNFYVLTRYN RSFFYAAAVY
ELGQAVRQAM RG