Gene RSc0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0915 
SymbolrfaD 
ID1219723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp966945 
End bp967940 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID637237277 
ProductADP-L-glycero-D-manno-heptose-6-epimerase protein 
Protein accessionNP_519036 
Protein GI17545634 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA TCGTGACCGG CGCGGCCGGC TTCATCGGCG CCAACCTCGT CAAGGGCCTC 
AATGACCGCG GCGAGACCGA CATCATCGCG GTCGACAACC TGACCCGCGC CGACAAGTTC
AGGAACCTGG TCGACTGCGA GATCAGCGAC TACCTGGACA AGACCGAGTT CGTCGAGCGC
TTTGCGCGCG GCGACTTCGG CAAGGTCCGC GCGATCTTCC ACGAGGGCGC CTGCTCCGAC
ACCATGGAGA CCGACGGCCG CTACATGATG GAGAACAACT ACCGGTACAC GCTCGCGCTG
ATGAAGGCCT GCCTGGACCA GGGCGTGCAG TTCCTCTACG CGTCGTCGGC GGCCACCTAC
GGCGCGTCGG ACACCTTCCG CGAGGACCGC GAGTTCGAGA AGCCGCTCAA CGTGTACGGC
TACTCCAAGT TCCTGTTCGA CCAGATCGTG CGCCGCACGC TGCCGGGCGC GCTGTCGCAG
ATCGTTGGCT TCCGCTATTT CAACGTCTAC GGCCCGCGCG AGCAGCACAA GGGGCGCATG
GCGTCGGTGG CCTTCCACAA CTTCAACCAG TTCCGCACGG AAGGCACCGT CAAGCTGTTC
GGCGAGTACA ACGGCTATCC GCAGGGTGGC CAGATGCGCG ACTTCGTGTC GGTGGAGGAC
GTGGTCAAGG TCAACCTGTT CTTCTTCGAC CATCCGGACA AGTCGGGCAT CTTCAACCTC
GGTACCGGCC GCGCCCAGCC GTTCAACGAC ATCGCGACCA CCGTGGTGAA CACCCTGCGC
GAGGCCGAAG GCAAACCGGC GCTCTCGACC GAAGAGTTGG CGCAGGAAGG CCTGGTCGAA
TACGTGAAAT TTCCCGATGC GCTGCGCGGC AAATACCAGT GCTTCACCCA GGCCGACCAG
GGCAAGCTGC GCGCGGCTGG CTACAGCGCG CCGTTCCTGA CCGTGCAGGA AGGCGTGGCG
CGCTACTGCC GCTGGCTGAT GGCCCAGCCG GCCTGA
 
Protein sequence
MTIIVTGAAG FIGANLVKGL NDRGETDIIA VDNLTRADKF RNLVDCEISD YLDKTEFVER 
FARGDFGKVR AIFHEGACSD TMETDGRYMM ENNYRYTLAL MKACLDQGVQ FLYASSAATY
GASDTFREDR EFEKPLNVYG YSKFLFDQIV RRTLPGALSQ IVGFRYFNVY GPREQHKGRM
ASVAFHNFNQ FRTEGTVKLF GEYNGYPQGG QMRDFVSVED VVKVNLFFFD HPDKSGIFNL
GTGRAQPFND IATTVVNTLR EAEGKPALST EELAQEGLVE YVKFPDALRG KYQCFTQADQ
GKLRAAGYSA PFLTVQEGVA RYCRWLMAQP A