| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0912 |
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| Symbol | |
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| ID | 1219720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 963264 |
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| End bp | 964541 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237274 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | NP_519033 |
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| Protein GI | 17545631 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG ATCTCTGGTG GCTGCTGGCC ATCCCCCTGG TGTTCGGCTT GGGCTGGGTG
GCGGCCCGGC TGGATGCCCG ACAACTGCTG ACCGAACAGG CGTCGCTGCC GCGCTCCTAT
TTCAAGGGGC TGAATTTCCT CCTCAACGAG CAGCCGGACA AGGCGATCGA CGCCTTCATC
GAAGTCGCGC GCCTGGACCC CGAAACCACC GAGCTGCACT TCGCGCTGGG CAGCCTGTTC
CGCCGCCGCG GCGAAACCGA GCGCGCCATC CGCGTGCACC AGAACCTGGT CAACCGGCCG
GACTTGCCGG CCAACGAGCG CGACCACGCG CTGTATGAGC TGGGCCAGGA TTTCCTGCGT
GCCGGCCTGC TGGACCGTGC CGAAGAATCG CTGCGCATGC TGATGGAAGG CGTGTTTGCC
GAGCCGGCCA AGCGCGTGCT GCTGGAGCTG TACGAGGTCG AGAAAGAGTG GCGCAAGGCG
ATCGATGCCG CGCGCGAACT GCAGACGCTG CAGGGCCAGG ATTATTCGGT GCAGATCGCC
CAGTTCTGCT GCGAGCTGGC GCAGGAATCG CTGCAGCGCA AGGACGTGTC GGCTGCCGTC
GAATGGCTTG AGCGCGCCCT GCAGGAGAAC CCGAAGAACG TTCGCGCCAC CATCCAGCTG
GGCGACGTGG CGCTGGGCAA GGGCGATACC GAAGGCGCGA TCAAGCGCTG GCGCAGCATC
GAGCAGCAGA ACCCGGCCTT CCTGCCGCTG GTGGCCGAGC GCCTGATGAA AGCCTACGCG
CAGCTCGGCC GTGCCGCCGA GGGCCTGGCC TGGCTGCGCT CCAAGATGGA CGCGCGCCTT
GGCCCCGAGC TGCTGGACGT CGTCTACCGC TATGAGCTGG ACGTGCACGG CATCGACGAT
GCCGTCGCGC TGATGCGCGA GCAGATCCGC CGCCAGCCTT CGCTGATGGC GCTCACGCGC
CTGGTCGAAG CCGAGGCGAC GCGCGCCTCC GAAGCCGTGA GCCACGAGGC CGCGGCGGTT
GCCGCGCCCA TCAGTGACAG TGCGCTGGCC GATCCGGTGG AGGCCGGCAG CAACGCCGAC
ATCCAGCGCG CGCAAGACCT CGGCGCCATC CGCGACCTGC TGCAGAGCCG CACCCGCAAC
CTGGCCCGCT ACACCTGCCA GGAGTGCGGC TTCCGCGCGC GCCTGTTCTA TTGGCAATGT
CCGGGCTGCA ACCGCTGGGA AACCTACGCG CCGCGCCGTA CCGAAGCGCT CGGCGGCAGC
GGTGGCGCCA GCATGTAA
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| Protein sequence | MDFDLWWLLA IPLVFGLGWV AARLDARQLL TEQASLPRSY FKGLNFLLNE QPDKAIDAFI
EVARLDPETT ELHFALGSLF RRRGETERAI RVHQNLVNRP DLPANERDHA LYELGQDFLR
AGLLDRAEES LRMLMEGVFA EPAKRVLLEL YEVEKEWRKA IDAARELQTL QGQDYSVQIA
QFCCELAQES LQRKDVSAAV EWLERALQEN PKNVRATIQL GDVALGKGDT EGAIKRWRSI
EQQNPAFLPL VAERLMKAYA QLGRAAEGLA WLRSKMDARL GPELLDVVYR YELDVHGIDD
AVALMREQIR RQPSLMALTR LVEAEATRAS EAVSHEAAAV AAPISDSALA DPVEAGSNAD
IQRAQDLGAI RDLLQSRTRN LARYTCQECG FRARLFYWQC PGCNRWETYA PRRTEALGGS
GGASM
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