Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0905 |
Symbol | hisC2 |
ID | 1219713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 956302 |
End bp | 957426 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237267 |
Product | histidinol-phosphate aminotransferase |
Protein accession | NP_519026 |
Protein GI | 17545624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGC AGTTCGGCCC CGAATATGTC CGTGCCATTG CCCCCTATGT GACCGGCAAG CCGATTTCCG AAGTCGCGCG CGAGTTCGGT CTGGAGGCGG CGCGCATCGT CAAGCTGGCG TCCAACGAGA ACCCGCTGGG CATGCCGGCA TCGGCCAGGG TGGCAATGAC GGCTGCCATC GATGGGCTGG CGCGCTATCC GGACGCCAAC GGTTTCAGCC TGAAGGCCGC GCTGCACGCG AAGTTCGGCG TGCCGGAGGC CTGGATCACG CTCGGCAACG GCAGCAACGA CATCCTCGAA CTCGCTGCGC GCGCCCTGGT GGCACCGGGG CAAGGCGTGA TCTACGCGCA GCATGCGTTT GCCGTGTATG CGCTGGCGGC GCAGGAGGTC GGTGCACGGG CCGTCGAGGT GCCGGCCCGC GACTATGGCC ACGATCTGGA CGCGATGGCC GCCGCCATCA CGCCGGACAC GCGCCTGATC TACGTCGCCA ACCCGAACAA TCCGACCGGC ACCTTCCTGC CGGCCGACGC GGTCGCTGCG TTCCTGGCCA AGGTGCCGCC GACGGTCGTC GTCGTGCTGG ACGAGGCGTA CAACGAATTC CTCAAGCCCG AGCAACAGTA CGACTCGATC GCGTGGGTGC GTCGGTATCC GAACCTGCTG GTGTCGCGCA CGTTCTCCAA GGCCTACGGG CTGGCCGGCC TGCGTGTCGG CTACGGCATC GCGCAGCCGC AGCTGACGGC GCTACTCAAT CGGATCCGCC AGCCGTTCAA CGTCAACAGC CTCGCGCAGG CCGCAGCTGT CGCCGCGCTG AGCGACACCG AATTCCTGCG CAGATCGGCC GAACTGAACG CCGCGGGCTA TGCGCAGCTG ACGCAGGCGT TTGCGCGCCT CGGGCTGGAA TACGTGCCGT CGTCGGGTAA CTTCGTGCTG GTCCGTGTCG GCGACGATGC GGATGCGGGC GCGCGCGTCA ATCTGGCGCT GCTCAGGCAG GGCGTGATCG TGCGGCCGGT GGGCAACTAT GGCCTGCCGC AGTGGCTGCG CATCAGCATC GGGCTGCCGG AGGAGAATGC CGCCTGCATC GCTGCGCTGG AGTCGGCGCT GGCGCAGGCC GAGGCCGCCG CCTGA
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Protein sequence | MSLQFGPEYV RAIAPYVTGK PISEVAREFG LEAARIVKLA SNENPLGMPA SARVAMTAAI DGLARYPDAN GFSLKAALHA KFGVPEAWIT LGNGSNDILE LAARALVAPG QGVIYAQHAF AVYALAAQEV GARAVEVPAR DYGHDLDAMA AAITPDTRLI YVANPNNPTG TFLPADAVAA FLAKVPPTVV VVLDEAYNEF LKPEQQYDSI AWVRRYPNLL VSRTFSKAYG LAGLRVGYGI AQPQLTALLN RIRQPFNVNS LAQAAAVAAL SDTEFLRRSA ELNAAGYAQL TQAFARLGLE YVPSSGNFVL VRVGDDADAG ARVNLALLRQ GVIVRPVGNY GLPQWLRISI GLPEENAACI AALESALAQA EAAA
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