Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0886 |
Symbol | |
ID | 1219694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 919924 |
End bp | 920871 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637237248 |
Product | hypothetical protein |
Protein accession | NP_519007 |
Protein GI | 17545605 |
COG category | [S] Function unknown |
COG ID | [COG2958] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAGTG ACAAGCTGAA CCTGGGCAAG ACGGTTCTTG CCTTCCTGCA GACCCACAGT GGGGAGAAGT TCACCGCGCG GCAGATCGCC GAATGGGTGT TCGAGACCTT CCCCGCCGAG TGCCAGGCGA AAAAGGCACG CAGCCAAGCG CTGGCAACGG ACGCAGCACT CCTGCAGCAA CTGGCAGCTG AAATCGGCTC ACAACGACCA CAGCTGCAGA AGAAGCATCC CGAATTGAAG ATCACCGAGG GGCGGCCGCG CCGGTACTAC TACTCCGAGC AGTCCGATGC CGACGAGGTG ATGCAGGCCG AGGATGCCGA GGTCACCACG ACTGCGGCAG AGCCTGGCTT AAAAGGCGAA CATGCGCTCT ACCCCCTGCT GGCCCGGTAC CTTTGGGAAG AACTGGACAT CTACACCAAG CGCATCGATG AGAAACGCTC GTCCAACAAG CGCGGCTCCA ATGGCAACCG CTGGCTGTTC CCGGACTTGG TCGGCATGGA GGACTTGGGC CGAGAATGGC ACCGCGAAGT CCAAGATTGC GTCAAACAGT ACGCGGGCCA GCGGACCAAG CTGTGGTCCT TCGAGGTCAA GCTGCTGCTC AACCGCTCGA ATGTGCGGGA ATATTTCTTC CAGGCGGTGT CGAACTCGTC CTGGGCCAAC TTCGGTTACC TCGTTGCGGG CGAAGTGCAG GCCGACACGA TGAAGGAATT GCGGATGCTG TCAGGCGTGC ACGGCATCGG GCTCATCCGG CTGGACACCA ACCCCTCCGA GAGCGAGATC CTCATCCCAG CTCGCGAGCG GCCGGAAATC GATTGGGAGT CGGCCAACCG GCTGGCAGCC GAAAACAAGG ATTTCCTGGA CTACATCAAG CTCGTCAAGC AGCTGTACCA GACGGGCGAA GCGCGCGCCT CGGACTGGGA TGTTCCGACG GCGCCGCTGG ACTTCTGA
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Protein sequence | MASDKLNLGK TVLAFLQTHS GEKFTARQIA EWVFETFPAE CQAKKARSQA LATDAALLQQ LAAEIGSQRP QLQKKHPELK ITEGRPRRYY YSEQSDADEV MQAEDAEVTT TAAEPGLKGE HALYPLLARY LWEELDIYTK RIDEKRSSNK RGSNGNRWLF PDLVGMEDLG REWHREVQDC VKQYAGQRTK LWSFEVKLLL NRSNVREYFF QAVSNSSWAN FGYLVAGEVQ ADTMKELRML SGVHGIGLIR LDTNPSESEI LIPARERPEI DWESANRLAA ENKDFLDYIK LVKQLYQTGE ARASDWDVPT APLDF
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