Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0871 |
Symbol | |
ID | 1219679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 904468 |
End bp | 904881 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237233 |
Product | putative plasmid stability-like protein |
Protein accession | NP_518992 |
Protein GI | 17545590 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.852163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0312935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTTACC TGATCGACAC CAATGTCCTG TCCGAATTGC GTCGCAAAGC GCCCGATGCG CGCGTGGCGG CCTGGATGCA GGACCGCCCG CGCCAGTCGC TCTACCTGAG CGTGCTGACC CTGGGCGAGA TTCGCAAAGG TATCGAGCGG CTGGAGGACG CGGTACGCCG CCAGAACCTG ATTGACTGGC TCGAAGTGGA ACTGCCGAAC TACTTTCTCG GCCGATTGCT CGACATCGAT GCACATACTG CGGACCGCTG GGGCCGGTTG ATGTCCTCGG CTGGCCGCCC CCTGCCCGCC ATTGACGGCC TGCTGGCCGC GACCGCCCTG CAACACGACC TCACGCTGGT CACGCGCAAC ACCAAAGATT TCGCGGGGCT CGACATCCAG CTCATCAACC CCTGGGAAGC CTGA
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Protein sequence | MSYLIDTNVL SELRRKAPDA RVAAWMQDRP RQSLYLSVLT LGEIRKGIER LEDAVRRQNL IDWLEVELPN YFLGRLLDID AHTADRWGRL MSSAGRPLPA IDGLLAATAL QHDLTLVTRN TKDFAGLDIQ LINPWEA
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