Gene RSc0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0806 
Symbol 
ID1219614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp854059 
End bp854844 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID637237168 
Productaldolase II superfamily protein 
Protein accessionNP_518927 
Protein GI17545525 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.666611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.411116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTG CCATACGCCC CGGCGCCGCC GCATCCGGCG GCCGGATCAG CGAGGCCGAG 
CGCGCCGTGC GCATCGACCT GGCCGCCGCC TACCGGCTGG CCGCGCTCAA CGGTTGGGAT
GACCTGATCT ACACCCATCT GTCGGCCACC GTCCCCGGTG AGCCGGAGCA CTTCCTCATC
AACGCCTTCG GCCTGGCCTT CGACGAGATC ACCGCCTCCA GCCTCGTCAA GATCAACCGC
GCCGGCCAGC TGGTCGGCGA CTGGCCTGAT CCCGCCGCGT GCCCGTCCGT CAACGTCACC
GGCTTCGCGC TGCATGCCGC CGTGCATGCG GCGCGTCCGG ACGCGCATTG CGTGATCCAC
CTGCACAATA CGGCGGGCAT CGCGGTCTCC GCCCAGCAGC ACGGGCTGCT GCCGCTGTCG
CAGCACGCGC TGCGCTTCCA CCGTCGCCTC GCCTATCACG ACTACGAGGG CCTGGCCTTC
ACGCAGGAAG AGGGCGCGCG GCTGACCGCC TCGCTGGGCG GCCACCGCGC CATGCTGCTG
CGCAACCACG GCACGCTCAC GGTCGGCCGC ACCGTGGCCG AGGCCCATGT GCTGATGGCC
ACGCTCATCA AGGCCTGCGA GATCCAGATC CAAGCGCTGA CGGCCGGCGC GGTCATCACG
CCCGCACCAC GTGTTGCCGA CCGCGCCGCC GAGCAACTGG AGGACGGCGG CGCCATCGAG
GGCATGCTGG AGTGGCCGGC CCTGCTGCGC AAACTGGATA GAATGAACCG CTCGTATCGC
GACTAA
 
Protein sequence
MSFAIRPGAA ASGGRISEAE RAVRIDLAAA YRLAALNGWD DLIYTHLSAT VPGEPEHFLI 
NAFGLAFDEI TASSLVKINR AGQLVGDWPD PAACPSVNVT GFALHAAVHA ARPDAHCVIH
LHNTAGIAVS AQQHGLLPLS QHALRFHRRL AYHDYEGLAF TQEEGARLTA SLGGHRAMLL
RNHGTLTVGR TVAEAHVLMA TLIKACEIQI QALTAGAVIT PAPRVADRAA EQLEDGGAIE
GMLEWPALLR KLDRMNRSYR D