Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0806 |
Symbol | |
ID | 1219614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 854059 |
End bp | 854844 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237168 |
Product | aldolase II superfamily protein |
Protein accession | NP_518927 |
Protein GI | 17545525 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.666611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.411116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTG CCATACGCCC CGGCGCCGCC GCATCCGGCG GCCGGATCAG CGAGGCCGAG CGCGCCGTGC GCATCGACCT GGCCGCCGCC TACCGGCTGG CCGCGCTCAA CGGTTGGGAT GACCTGATCT ACACCCATCT GTCGGCCACC GTCCCCGGTG AGCCGGAGCA CTTCCTCATC AACGCCTTCG GCCTGGCCTT CGACGAGATC ACCGCCTCCA GCCTCGTCAA GATCAACCGC GCCGGCCAGC TGGTCGGCGA CTGGCCTGAT CCCGCCGCGT GCCCGTCCGT CAACGTCACC GGCTTCGCGC TGCATGCCGC CGTGCATGCG GCGCGTCCGG ACGCGCATTG CGTGATCCAC CTGCACAATA CGGCGGGCAT CGCGGTCTCC GCCCAGCAGC ACGGGCTGCT GCCGCTGTCG CAGCACGCGC TGCGCTTCCA CCGTCGCCTC GCCTATCACG ACTACGAGGG CCTGGCCTTC ACGCAGGAAG AGGGCGCGCG GCTGACCGCC TCGCTGGGCG GCCACCGCGC CATGCTGCTG CGCAACCACG GCACGCTCAC GGTCGGCCGC ACCGTGGCCG AGGCCCATGT GCTGATGGCC ACGCTCATCA AGGCCTGCGA GATCCAGATC CAAGCGCTGA CGGCCGGCGC GGTCATCACG CCCGCACCAC GTGTTGCCGA CCGCGCCGCC GAGCAACTGG AGGACGGCGG CGCCATCGAG GGCATGCTGG AGTGGCCGGC CCTGCTGCGC AAACTGGATA GAATGAACCG CTCGTATCGC GACTAA
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Protein sequence | MSFAIRPGAA ASGGRISEAE RAVRIDLAAA YRLAALNGWD DLIYTHLSAT VPGEPEHFLI NAFGLAFDEI TASSLVKINR AGQLVGDWPD PAACPSVNVT GFALHAAVHA ARPDAHCVIH LHNTAGIAVS AQQHGLLPLS QHALRFHRRL AYHDYEGLAF TQEEGARLTA SLGGHRAMLL RNHGTLTVGR TVAEAHVLMA TLIKACEIQI QALTAGAVIT PAPRVADRAA EQLEDGGAIE GMLEWPALLR KLDRMNRSYR D
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