Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0778 |
Symbol | |
ID | 1219585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 822815 |
End bp | 823480 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237139 |
Product | hypothetical protein |
Protein accession | NP_518899 |
Protein GI | 17545497 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3531] Predicted protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.544779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0154482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTGA TCTACGTTGC CGATCCGATG TGCTCGTGGT GCTACGGCTT CGGCCCGCAG CTGGCGGACC TGCGCGCGCG GCTGGCCGAC ACGCTGGGCG CGCCGGTGCC GGTCACCCTC GTCACCGGCG GCCTGCGTCC GGGCCAGCGC GAGCCGCTGC CCGCGGCCAA GCGCGAGGAG ATCCTGCACC ACTGGCACGC CGTGGCCGAG CGCAGCGGCG TGCCGTTCAG CCACGCGCCC GACGCGGCCA TGCGCCGGGA GGGCTTCGTC TACGACACCG AGCCCGCCTG CCGCGTCGTG GTGATGGCGC GCGAATACTG GGACGAAACG GACGAGCGCG TGCTCACCTG CTTCCATGCG ATTCAGCATG CCTTCTACGC CGAAGGCCGC GACACCACGC GCACCGAGGT GCTGCGCGAG ATCGCCATCG CCGGCGGCCT GGCGGCGGAC CATGTCGACA CGGTGTTCGA CTCCGAAGCG CTACGCAACG AAACGCGGGA AGACTTCCGC CTGGCACGCC GCTGGGGAAT CACGGGCTTC CCCAGCCTGC TGGCCGAACA GGCCGGCACG CTGTACCAGA TCGGACGCGG CTACGCGCCA TCGGTGGCGC TGTACGCACG CGCCGTGGAA GTGCTGGCGC AGCACCCGGC GCCCGACGCC GGCTAA
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Protein sequence | MRLIYVADPM CSWCYGFGPQ LADLRARLAD TLGAPVPVTL VTGGLRPGQR EPLPAAKREE ILHHWHAVAE RSGVPFSHAP DAAMRREGFV YDTEPACRVV VMAREYWDET DERVLTCFHA IQHAFYAEGR DTTRTEVLRE IAIAGGLAAD HVDTVFDSEA LRNETREDFR LARRWGITGF PSLLAEQAGT LYQIGRGYAP SVALYARAVE VLAQHPAPDA G
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