Gene RSc0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0738 
Symbol 
ID1219544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp784520 
End bp785194 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637237098 
Productputative signal peptide protein 
Protein accessionNP_518859 
Protein GI17545457 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.593438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCGCCATCGT CCTGCTGTCC GGCGGGCTGG ATTCCGCCAC CGTGCTCGCC 
ATGGCCAACG CGCAGGGCTT CGAGACCTAC GCGCTGTCGA TGCGCTACGG TCAGCGTCAT
TCTTCCGAGC TGGAGGCGGC CAAGAAGGTG GCCGCCGCGC TGGGGGCCGT CCGCCATGAG
ATCGTCGATC TGGACCTGCG CCGCTTCGGT GGTTCCGCGC TCACCGATGA TGCGCTCGAA
GTGCCGACCA CGGGCGTGCA GGAGGGGATC CCCATCACCT ACGTGCCGGC GCGCAACACC
ATCATGCTGT CGCTGGCGCT GGGCTGGGCG GAGGCTGTCG GGGCACGCGA CCTGTTCTTC
GGCGCCAATG CCGTCGACTA TTCCGGCTAC CCCGACTGCC GCCCCGAGTA CGTCGCCGCC
TACGAGACGC TGGCGAACCT GGCCACGAAG GCCGGCGTGG AAGGCGATCA CATCCGCGTC
AATGCGCCGA TCATCGCCAT GACCAAGGCC GAGATCATCC AGGCCGGCGC ACGGCTGGGC
GTCGACTACA GCCTGACCGT GTCGTGCTAC CAGGCCGACG ATGAGGGCCG CGCGTGCGGC
GTCTGCGATT CGTGCCGCAT CCGCCGTGCC GGCTTCGAGG CGGCGGCGGT GCCGGACCCG
ACGCGCTATC GCTGA
 
Protein sequence
MKKRAIVLLS GGLDSATVLA MANAQGFETY ALSMRYGQRH SSELEAAKKV AAALGAVRHE 
IVDLDLRRFG GSALTDDALE VPTTGVQEGI PITYVPARNT IMLSLALGWA EAVGARDLFF
GANAVDYSGY PDCRPEYVAA YETLANLATK AGVEGDHIRV NAPIIAMTKA EIIQAGARLG
VDYSLTVSCY QADDEGRACG VCDSCRIRRA GFEAAAVPDP TRYR