Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0738 |
Symbol | |
ID | 1219544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 784520 |
End bp | 785194 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237098 |
Product | putative signal peptide protein |
Protein accession | NP_518859 |
Protein GI | 17545457 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.593438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC GCGCCATCGT CCTGCTGTCC GGCGGGCTGG ATTCCGCCAC CGTGCTCGCC ATGGCCAACG CGCAGGGCTT CGAGACCTAC GCGCTGTCGA TGCGCTACGG TCAGCGTCAT TCTTCCGAGC TGGAGGCGGC CAAGAAGGTG GCCGCCGCGC TGGGGGCCGT CCGCCATGAG ATCGTCGATC TGGACCTGCG CCGCTTCGGT GGTTCCGCGC TCACCGATGA TGCGCTCGAA GTGCCGACCA CGGGCGTGCA GGAGGGGATC CCCATCACCT ACGTGCCGGC GCGCAACACC ATCATGCTGT CGCTGGCGCT GGGCTGGGCG GAGGCTGTCG GGGCACGCGA CCTGTTCTTC GGCGCCAATG CCGTCGACTA TTCCGGCTAC CCCGACTGCC GCCCCGAGTA CGTCGCCGCC TACGAGACGC TGGCGAACCT GGCCACGAAG GCCGGCGTGG AAGGCGATCA CATCCGCGTC AATGCGCCGA TCATCGCCAT GACCAAGGCC GAGATCATCC AGGCCGGCGC ACGGCTGGGC GTCGACTACA GCCTGACCGT GTCGTGCTAC CAGGCCGACG ATGAGGGCCG CGCGTGCGGC GTCTGCGATT CGTGCCGCAT CCGCCGTGCC GGCTTCGAGG CGGCGGCGGT GCCGGACCCG ACGCGCTATC GCTGA
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Protein sequence | MKKRAIVLLS GGLDSATVLA MANAQGFETY ALSMRYGQRH SSELEAAKKV AAALGAVRHE IVDLDLRRFG GSALTDDALE VPTTGVQEGI PITYVPARNT IMLSLALGWA EAVGARDLFF GANAVDYSGY PDCRPEYVAA YETLANLATK AGVEGDHIRV NAPIIAMTKA EIIQAGARLG VDYSLTVSCY QADDEGRACG VCDSCRIRRA GFEAAAVPDP TRYR
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