Gene RSc0712 details

Gene Information

• Locus tag: RSc0712
• Symbol: ribH
• ID: 1219518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 760036
• End bp: 760530
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637237072
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: NP_518833
• Protein GI: 17545431
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.636239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATCACG GCTTCTACCC GACCAACCTC GAAGGCGAAG GCCTGCGCAT CGGCATCGTT 
CAGGCGCGTT TCAACGAGCC CGTGTGCGAA GCGCTGCGCG AAGCGTGCGT CGCCGAGCTC 
GAGCAGTTGG GCGTGGCGGG CGAGGACGTG CTGCTGGTTA CCGTGCCGGG CGCGCTGGAA 
GTGCCGCTCG CCCTGCAGAA GATGGCCGAA TCGGGCCAGT TCGACGCGCT GATCGCGCTG 
GGTGCCGTGA TCCGCGGCGA GACCTATCAT TTCGAGTTGG TGTCCAACGA GTCCGGCGCC 
GGCATCACGC GCGTCTGCCT GGACTTCAAC ATCGCCATCG CCAACGGCAT CCTGACCACC 
GACACCGACG CGCAGGCCCA CGCCCGCACG CGCGAGAAGG GCCGCGACTG CGCCCGCACC 
GCCATCGAAA TGGCCAACCT GACCGCCGCC CTGGACGGCC TGCAAGACCA CGGCCAGGAC 
GACGAGAACG AATAA 

 

Protein sequence

MDHGFYPTNL EGEGLRIGIV QARFNEPVCE ALREACVAEL EQLGVAGEDV LLVTVPGALE 
VPLALQKMAE SGQFDALIAL GAVIRGETYH FELVSNESGA GITRVCLDFN IAIANGILTT 
DTDAQAHART REKGRDCART AIEMANLTAA LDGLQDHGQD DENE