Gene RSc0685 details

Gene Information

• Locus tag: RSc0685
• Symbol: rfbC
• ID: 1219490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 732998
• End bp: 733549
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637237044
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase protein
• Protein accession: NP_518806
• Protein GI: 17545404
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCTGA ACGTCGTTCC CACCGCCATT CCGGAGGTCC TGATCCTCGA GCCGAAAGTG 
TTTGGCGACG ACCGGGGCTT CTTCTTCGAG AGCTTCAACG CGCGTGCCTT CGAGCAGGTC 
ACGGGCGTCA AGCGGACCTT CGTTCAGGAC AACCATTCGC GCTCGGCCCG CAATGTGCTG 
CGCGGCTTGC ACTACCAGAT CCAGCATCCG CAGGGAAAGC TGGTGCGCGT GACGGTCGGT 
GAAGTCTTCG ATGTCGCGGT CGATCTGCGC AAGCGCTCGC CGACCTTCGG CAAGTGGGTC 
GGCGTGACGC TGTCGGCGGA GAACAAGCGC CAGCTGTGGG TGCCGGAAGG GTTTGCGCAT 
GGCTTTGTCG TGACCTCCGA CCACGCCGAG TTCCTGTACA AGACCACCGA CTACTGGTAC 
GCCGAACACG AGCGCAGCAT CGTCTGGAAC GACCCGGACC TCGGCATCGA GTGGCCGGTC 
CAGGGCACGC CGGTCCTGGC GGCGAAAGAT GCCGCCGGCG CGCGGTTTGC CAGCGCGGAC 
TTGTTCGACT GA 

 

Protein sequence

MNLNVVPTAI PEVLILEPKV FGDDRGFFFE SFNARAFEQV TGVKRTFVQD NHSRSARNVL 
RGLHYQIQHP QGKLVRVTVG EVFDVAVDLR KRSPTFGKWV GVTLSAENKR QLWVPEGFAH 
GFVVTSDHAE FLYKTTDYWY AEHERSIVWN DPDLGIEWPV QGTPVLAAKD AAGARFASAD 
LFD