Gene RSc0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0615 
Symbol 
ID1219420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp662013 
End bp662882 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID637236974 
Producttranscription regulator protein 
Protein accessionNP_518736 
Protein GI17545334 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.528971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGC AAGATCTGCA GCTGGATTGG CTCAAGTGCT TCGTCGCCGT GGTGGACGCG 
GGTTCGCTGT CGAGTGCGGC AGGGGAGGTG CACCGCTCCC AGTCGGCGGT CAGCATGCAG
CTCAAGAAGC TCGAGGGCGC ACTGGGGAGC CGGCTCCTCG AGCGGGATGC GCGCAAGCTT
GAGCTGACCC CCGAGGGGCA GATGCTGCTC GGCTATGCGC GGCGCATCCT CGATCTGCAT
GCCGAAGCCC AGGCCGCGCT CAGCGGCGAG GAACTCACCG GCCGGGTGCG GCTTGGCGTG
CCTGACGACT ACGCGGCCAA GTACCTGACG CCGGTGCTCA AGCGCTTTGC GCCCAGGCAC
GGCGGCGTCG AGATCGAATT GGACTGCGAG CAGTCGACCT CGCTCATTCC GCGTGTGGCC
AGCGGCGACC TTGACCTCGC CCTGGTGTCC CGCGATCACT CACGGCGCGG CATCCTGCTG
TTTCACGAGC CGATGGTCTG GGTGGGCGCC GTGCAGTTCG AGCTGTGGCG GCGGGACCCG
CTGCCGATCG CCGTCTACGA AGACACCAGC CTGGCGCGGC GCAGCGCGAT CCACTCCCTG
GCGCAGCAAG GACGCCGATA CAAGGTGGTC TACAACAGCT CCAGCCTGGC GGGGCAGATT
GCCGCCGTCG AGAGCGGCCT GGCGGTGGCG GCGCTGACCC AATGCAGCGC ACCCGGGCAC
CTGCAGATCC TGGGCAGCGA GCACGGATTG GGGCCACTCG AACCCATGGA AGTGGCCGTC
TACCGCAGCC GCGCCTCGCG CGGCTCGAAA GCGGTGGACA GCCTGCAGAA CCTGCTGGTC
AGGACGCTGA GGTTGTCGGG GCCGATCTGA
 
Protein sequence
MTPQDLQLDW LKCFVAVVDA GSLSSAAGEV HRSQSAVSMQ LKKLEGALGS RLLERDARKL 
ELTPEGQMLL GYARRILDLH AEAQAALSGE ELTGRVRLGV PDDYAAKYLT PVLKRFAPRH
GGVEIELDCE QSTSLIPRVA SGDLDLALVS RDHSRRGILL FHEPMVWVGA VQFELWRRDP
LPIAVYEDTS LARRSAIHSL AQQGRRYKVV YNSSSLAGQI AAVESGLAVA ALTQCSAPGH
LQILGSEHGL GPLEPMEVAV YRSRASRGSK AVDSLQNLLV RTLRLSGPI