Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0615 |
Symbol | |
ID | 1219420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 662013 |
End bp | 662882 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236974 |
Product | transcription regulator protein |
Protein accession | NP_518736 |
Protein GI | 17545334 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.528971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGC AAGATCTGCA GCTGGATTGG CTCAAGTGCT TCGTCGCCGT GGTGGACGCG GGTTCGCTGT CGAGTGCGGC AGGGGAGGTG CACCGCTCCC AGTCGGCGGT CAGCATGCAG CTCAAGAAGC TCGAGGGCGC ACTGGGGAGC CGGCTCCTCG AGCGGGATGC GCGCAAGCTT GAGCTGACCC CCGAGGGGCA GATGCTGCTC GGCTATGCGC GGCGCATCCT CGATCTGCAT GCCGAAGCCC AGGCCGCGCT CAGCGGCGAG GAACTCACCG GCCGGGTGCG GCTTGGCGTG CCTGACGACT ACGCGGCCAA GTACCTGACG CCGGTGCTCA AGCGCTTTGC GCCCAGGCAC GGCGGCGTCG AGATCGAATT GGACTGCGAG CAGTCGACCT CGCTCATTCC GCGTGTGGCC AGCGGCGACC TTGACCTCGC CCTGGTGTCC CGCGATCACT CACGGCGCGG CATCCTGCTG TTTCACGAGC CGATGGTCTG GGTGGGCGCC GTGCAGTTCG AGCTGTGGCG GCGGGACCCG CTGCCGATCG CCGTCTACGA AGACACCAGC CTGGCGCGGC GCAGCGCGAT CCACTCCCTG GCGCAGCAAG GACGCCGATA CAAGGTGGTC TACAACAGCT CCAGCCTGGC GGGGCAGATT GCCGCCGTCG AGAGCGGCCT GGCGGTGGCG GCGCTGACCC AATGCAGCGC ACCCGGGCAC CTGCAGATCC TGGGCAGCGA GCACGGATTG GGGCCACTCG AACCCATGGA AGTGGCCGTC TACCGCAGCC GCGCCTCGCG CGGCTCGAAA GCGGTGGACA GCCTGCAGAA CCTGCTGGTC AGGACGCTGA GGTTGTCGGG GCCGATCTGA
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Protein sequence | MTPQDLQLDW LKCFVAVVDA GSLSSAAGEV HRSQSAVSMQ LKKLEGALGS RLLERDARKL ELTPEGQMLL GYARRILDLH AEAQAALSGE ELTGRVRLGV PDDYAAKYLT PVLKRFAPRH GGVEIELDCE QSTSLIPRVA SGDLDLALVS RDHSRRGILL FHEPMVWVGA VQFELWRRDP LPIAVYEDTS LARRSAIHSL AQQGRRYKVV YNSSSLAGQI AAVESGLAVA ALTQCSAPGH LQILGSEHGL GPLEPMEVAV YRSRASRGSK AVDSLQNLLV RTLRLSGPI
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