| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0601 |
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| Symbol | |
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| ID | 1219406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 646622 |
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| End bp | 648265 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236960 |
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| Product | hypothetical protein |
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| Protein accession | NP_518722 |
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| Protein GI | 17545320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.184325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CCGTTGATAC CCGCGACATC CCCCCGCCCC GCCGCATGAA GCGCAAGCGC
TGGCTGCCCT CGCTGATCTG GCTGGTGCCG ATCGTGGCCC TGGCCGTGGG GGCCACGCTG
ATGACGCGCG TGATCCTGGC GCGCGGCGCG CAGATCACCG TCACCTTCAG TTCGGCCGAG
GGCATCGAGG CGGGCAAGAC GCGCGTCAAG TACAAGAGCG TGGACATCGG CGTGGTGAAA
TCCGTCGGCC TGACCGACGA CCGCTCCGGC GCCGTCGTGC TGATCGAGCT GACGCGCGAC
GGCAAGGCCT TCGCGGTGGC GGACACGCGC CTCTGGGTGG TGCGCCCGCG CGTGGCGGCA
GGCAGCATCT CGGGGCTGGG CACGCTGCTG TCGGGCGCCT ACATCGGCGT GGACGGCGGC
CGCGCCAAGG AGCACAAGTC CGTCTTCAAG GGGCTCGACA CGCCGCCGGC CATCTACGCC
GATACGCCCG GCAGGCAGTT CACGCTGCAC GCCAACGACC TGGGCTCGCT CGACACCGGC
GCGCCGGTGT ACTTCCGCCG CGTGCGCGTC GGCCAGGTCA CCAGCTACGA CATCGACGCC
GACGGCAAGG GTGTGACGCT GCACATCTTC GTCAACGCGC CGTTCGACCG GTTCGTCACG
CGCAGCTCGC GCTTCTGGAA CGCCAGCGGC ATCGACCTCA AGCTCGACGC CAGCGGCCTG
AAGGTCGACA TGCAATCGCT GCTGACGGTG GCGCTGGGCG GCATTGCCTT CCAGTCGCCG
GAGGACGCCG ACCGCGACCC CGCCCCGCAG AACACCGAGT TCGAGCTGGT GCGCAACGAG
GCGATGGCCC TGAAGGACCC CGAGCACGTC TCGCAGACCG TGGTGATGTA CTTCCACCGC
TCGCTGCGCG GCCTGACGGT GGGCGCGCCG GTGGAGTTCA AGGGCATCAA CGTGGGCGAG
ATCAAGTCGA TCGGCATCCA TTACAGCAAG GAGCGCCACG AGTTCGTGCT GCCGGTGACG
GCGGTGCTGT ACCCGACGCG CTTCGGCATG GACGTCCGCG ACGACACCGC CGCGCACGCC
ACCGAGGACA CCCGCGCCCA GTTCGACACG CTGATCCGCA ACGGCATGCG CGCGCAGCTC
AAGAGCGCCA GCCTGCTGAC CGGGCAGCAG TTCGTGCAGC TCGACTTCGT CGAGCCGGCC
GACCGCGGCA AGACGCCGCC ACGCTTCGGC CTGCGCGAGC GCGGCGGCGC CTACGTTTTC
CCGACCGCCG ACAATCCGAC CGACGACATC GAGGCCCAGA TCGCCGGCAT CGTGAAGAAG
CTCAACAAGG TGCCGTTCGA GCAGATCGGC CAGGACGTGC ACCGCGCCCT GAACTCGCTC
GACGCGACGC TCAAGCAGAC CGAGCAGCTG GCCAAGACCG TCAACAACGA CCTGGCGCCG
CAGATGAAGG ACACGCTGGC CGAGGCCCGC CGCACGCTGG AGACCGCGCG CCAGACCTTC
TCCGAGGATG CCCCGCTGCA GCGCAACGCG CGCGACACAC TGGAGCAGGT GGCCAAGGCC
GCCGCCTCCG TGCGCGTGCT GACCGACTAC CTGGACCGAC ACCCCGAGGC CCTGATCCGG
GGCAAGGCAA AGGACGCCCA ATGA
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| Protein sequence | MTDPVDTRDI PPPRRMKRKR WLPSLIWLVP IVALAVGATL MTRVILARGA QITVTFSSAE
GIEAGKTRVK YKSVDIGVVK SVGLTDDRSG AVVLIELTRD GKAFAVADTR LWVVRPRVAA
GSISGLGTLL SGAYIGVDGG RAKEHKSVFK GLDTPPAIYA DTPGRQFTLH ANDLGSLDTG
APVYFRRVRV GQVTSYDIDA DGKGVTLHIF VNAPFDRFVT RSSRFWNASG IDLKLDASGL
KVDMQSLLTV ALGGIAFQSP EDADRDPAPQ NTEFELVRNE AMALKDPEHV SQTVVMYFHR
SLRGLTVGAP VEFKGINVGE IKSIGIHYSK ERHEFVLPVT AVLYPTRFGM DVRDDTAAHA
TEDTRAQFDT LIRNGMRAQL KSASLLTGQQ FVQLDFVEPA DRGKTPPRFG LRERGGAYVF
PTADNPTDDI EAQIAGIVKK LNKVPFEQIG QDVHRALNSL DATLKQTEQL AKTVNNDLAP
QMKDTLAEAR RTLETARQTF SEDAPLQRNA RDTLEQVAKA AASVRVLTDY LDRHPEALIR
GKAKDAQ
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