| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0592 |
|---|
| Symbol | |
|---|
| ID | 1219397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 637759 |
|---|
| End bp | 638970 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637236951 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518713 |
|---|
| Protein GI | 17545311 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA TCGATGCGAA TCAGCTGCGT GTCGGTATGT TTGTGGTGAA GCTGGGCGGG
TCCTGGCTGA AGCACCCGTT CTGGCGTTCG CAGTTCCAAC TGTCGAGCCA GGCACAGGTC
GACGATATCT GTCGAGCCGG TATTACCGAG ATCTGGATCG ACCCCGAGCG CGGCGAAGAT
GTGCTTGCGC CCGCGCTGAT GCCGGCGGCG GCGCAGCCCG CTCCGGAGCC GCTGACCCGC
GAGACCCTGG CGGCGCTGCC GCCGGTCACG CCGACTTCCC TCAAGGAAGA ATGGAAGCAT
GCCCAGCAAC TGGTGCAGAG CGGCAAGGCG ACGCTGGGCC AGCTGTTCTC CGAGGCCCGC
ATGGGCCGCG CCTTGCAGAC CGACAAGGCG CTGCTGCTGG TCGACAACGT GTCCAATTCG
CTGGCGCGCA ACTCGTATGC GCTGATTGCC CTGGCTCGCC TGAAGAACAA GGACGACTAC
ACCTACCTGC ATTCGTTCGC CGTCTGCGCG CTGATGGTGG CTCTGGCCCG CACGCTCGGC
CTGTCCGAAG ACGAGATCCG CGAATGCGGT CTGGGCGGCC TGGTCCACGA CATCGGCAAG
TCGGCCATGC CGCGCACGCT GCTCGACAAG AGCACCGCGC TGACCAAGGA AGAACTGGCC
CTGCTGCAGA CCCACGCGGT CGGCGGGCAC CACCTGCTGA TCGGGACCGG CCAGTTCAGC
GAGATTCCGC GCGAAGTGTG CCTGCATCAC CATGAGCGCA TCGACGGCAG CGGCTATCCG
GACGGCCAGA AGGGCGACGA GATCAGCCTG TGGGCCAAGA TGGGCGCCAT CTGCGACGTG
TACGACACGC TCACGTCCAG CAGCCCCTAC CACCATGCGT GGTCGCCGGC GCAGGCGCTC
AAGTACATGA TGGCGCGCAC CGACAGCCAG TTCGACCGTA CCGTGTTCCA GGCGTTTACG
CGCAGCGTGG GCATCTATCC GGTCGGCACG CTGGTCAAGC TGCGCACCAA CCGGCTGGGC
GTGGTGGTGC ACCAGAACGA GTCGTCCGCG CTGCGTCCGG ACGTCGTCGT GTTTTATTCC
GGCAATACCA AGACGCGCGT GCGCCCCGAG CGCATCAGCC TGGGCCGTTC GGACGACGCC
ATCATCACGG TGGAGGACGC CTCCACCTGG GGCCTGTCGG AAGAGGAAGT GTCCGACATG
TGCCTGGTCT GA
|
|---|
| Protein sequence | MKRIDANQLR VGMFVVKLGG SWLKHPFWRS QFQLSSQAQV DDICRAGITE IWIDPERGED
VLAPALMPAA AQPAPEPLTR ETLAALPPVT PTSLKEEWKH AQQLVQSGKA TLGQLFSEAR
MGRALQTDKA LLLVDNVSNS LARNSYALIA LARLKNKDDY TYLHSFAVCA LMVALARTLG
LSEDEIRECG LGGLVHDIGK SAMPRTLLDK STALTKEELA LLQTHAVGGH HLLIGTGQFS
EIPREVCLHH HERIDGSGYP DGQKGDEISL WAKMGAICDV YDTLTSSSPY HHAWSPAQAL
KYMMARTDSQ FDRTVFQAFT RSVGIYPVGT LVKLRTNRLG VVVHQNESSA LRPDVVVFYS
GNTKTRVRPE RISLGRSDDA IITVEDASTW GLSEEEVSDM CLV
|
|---|
| |