Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0570 |
Symbol | |
ID | 1219375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 613404 |
End bp | 614300 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236929 |
Product | hypothetical protein |
Protein accession | NP_518691 |
Protein GI | 17545289 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCCC ATGTCCGCGG CGGCGTCATC TTTGCCTTCC TGGCCTACAC GATGTGGGGC CTGTTTCCGC TGTACTTCAA GCTGCTGAAG GCCGTCACGC CGCTGGAGAT CCTGTCGCAC CGGGTGATCT GGTCGCTGGC GGTGATGGTG GTGGTGCTGG CCGTCAAGCG GCACTGGGCG TGGCTGTGGG CGCTGCGCCG CCAGCCGCGC GTGGTGGGGC GGCACCTGGC CTGCACCGGC ATGCTGGCGC TCAACTGGTG CACCTACATC TGGGCGGTCA ATCACGATCA CGTGCTCGAC GCGAGCCTGG GCTATTTCAT CAACCCGCTG GTGGTGGTGC TGCTGGCGCT GCTGGTGCTG GGCGAGCGGC TGCGGCCGGG GCAGTGGTTC GCGCTGGCGC TGGCCGTCGC CGGGGTGGTC TGGCTGACCT GGCAGGCCGG GCACCTGCCG TGGATCGCGC TGGTGCTGGC GACGACCTTC GGCCTGTACG GCCTGCTGCG CAAGACTTCG CCGCTGGGCG CGCTGGAAGG GCTGGCGCTG GAGACGCTGC TGCTGTTTCC GCTCGCGCTG GCCTACCTGG GCTGGCTGGC CGCGCAGCAG CAGAACGTTT TCCTGGTCGC GCCGCCGGGC ATCCAACTGC TGCTGGTGCT GGCCGGCCCG CTGACCGCCG TGCCGCTGCT GCTGTTCGGG GCCGGGGCGC GGCGCATTCC GCTGTCGCTG CTGGGCCTGC TGCAGTACGT CAGCCCGACG CTGCAGCTGC TGCTGGGTGT GTGGCTCTAC AACGAGCCGT TCGGCGGGCC GAAGGTGCTC GGCTACGCGT TGATCTGGTG CGGCCTGGTT GTGTATTCGG CCGAAGGGTG GCTGCGGCTG CGGCGGCGCG CGCCGGTGGC GGCCTGA
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Protein sequence | MSAHVRGGVI FAFLAYTMWG LFPLYFKLLK AVTPLEILSH RVIWSLAVMV VVLAVKRHWA WLWALRRQPR VVGRHLACTG MLALNWCTYI WAVNHDHVLD ASLGYFINPL VVVLLALLVL GERLRPGQWF ALALAVAGVV WLTWQAGHLP WIALVLATTF GLYGLLRKTS PLGALEGLAL ETLLLFPLAL AYLGWLAAQQ QNVFLVAPPG IQLLLVLAGP LTAVPLLLFG AGARRIPLSL LGLLQYVSPT LQLLLGVWLY NEPFGGPKVL GYALIWCGLV VYSAEGWLRL RRRAPVAA
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