Gene RSc0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0570 
Symbol 
ID1219375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp613404 
End bp614300 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID637236929 
Producthypothetical protein 
Protein accessionNP_518691 
Protein GI17545289 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCCC ATGTCCGCGG CGGCGTCATC TTTGCCTTCC TGGCCTACAC GATGTGGGGC 
CTGTTTCCGC TGTACTTCAA GCTGCTGAAG GCCGTCACGC CGCTGGAGAT CCTGTCGCAC
CGGGTGATCT GGTCGCTGGC GGTGATGGTG GTGGTGCTGG CCGTCAAGCG GCACTGGGCG
TGGCTGTGGG CGCTGCGCCG CCAGCCGCGC GTGGTGGGGC GGCACCTGGC CTGCACCGGC
ATGCTGGCGC TCAACTGGTG CACCTACATC TGGGCGGTCA ATCACGATCA CGTGCTCGAC
GCGAGCCTGG GCTATTTCAT CAACCCGCTG GTGGTGGTGC TGCTGGCGCT GCTGGTGCTG
GGCGAGCGGC TGCGGCCGGG GCAGTGGTTC GCGCTGGCGC TGGCCGTCGC CGGGGTGGTC
TGGCTGACCT GGCAGGCCGG GCACCTGCCG TGGATCGCGC TGGTGCTGGC GACGACCTTC
GGCCTGTACG GCCTGCTGCG CAAGACTTCG CCGCTGGGCG CGCTGGAAGG GCTGGCGCTG
GAGACGCTGC TGCTGTTTCC GCTCGCGCTG GCCTACCTGG GCTGGCTGGC CGCGCAGCAG
CAGAACGTTT TCCTGGTCGC GCCGCCGGGC ATCCAACTGC TGCTGGTGCT GGCCGGCCCG
CTGACCGCCG TGCCGCTGCT GCTGTTCGGG GCCGGGGCGC GGCGCATTCC GCTGTCGCTG
CTGGGCCTGC TGCAGTACGT CAGCCCGACG CTGCAGCTGC TGCTGGGTGT GTGGCTCTAC
AACGAGCCGT TCGGCGGGCC GAAGGTGCTC GGCTACGCGT TGATCTGGTG CGGCCTGGTT
GTGTATTCGG CCGAAGGGTG GCTGCGGCTG CGGCGGCGCG CGCCGGTGGC GGCCTGA
 
Protein sequence
MSAHVRGGVI FAFLAYTMWG LFPLYFKLLK AVTPLEILSH RVIWSLAVMV VVLAVKRHWA 
WLWALRRQPR VVGRHLACTG MLALNWCTYI WAVNHDHVLD ASLGYFINPL VVVLLALLVL
GERLRPGQWF ALALAVAGVV WLTWQAGHLP WIALVLATTF GLYGLLRKTS PLGALEGLAL
ETLLLFPLAL AYLGWLAAQQ QNVFLVAPPG IQLLLVLAGP LTAVPLLLFG AGARRIPLSL
LGLLQYVSPT LQLLLGVWLY NEPFGGPKVL GYALIWCGLV VYSAEGWLRL RRRAPVAA