| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0541 |
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| Symbol | |
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| ID | 1219345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 585557 |
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| End bp | 586453 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236899 |
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| Product | pirin-like protein |
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| Protein accession | NP_518662 |
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| Protein GI | 17545260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0687971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCC TCGTACAACC CCGCGTGGAA CACGCCCGCC GCGTCGAACG CGTCGTCACC
GGCCACGCCA CCTCGGACGG CGCGGGCGTC AGGCTCACGC GCGTGCTGAC CCAGCCGCTG
CAGCGCCGGC TCGATCCGTT CCTGATGCTC GATGCCTTCC GCAGCGATGA CCCGAATGAC
TATCTGGCCG GCTTCCCCGA TCATCCGCAC CGCGGCTTCG AGACGGTGAC GTACATGATC
GCGGGCCGCA TGCGCCACCG CGACAACGCC GGCCACGAGG GCCTGCTGCA GACCGGCGGC
GTGCAATGGA TGACGGCCGG CAGCGGCATC GTGCATTCGG AGATGCCGGA GCAGGAGGAC
GGCGTGATGG AAGGCTTCCA GCTGTGGCTG AACCTGCCCG CGCGCGACAA GATGACGACG
CCGTGGTATC GCGACATCCC GTCGGCCGAG ATTCCCGGGT TCACGACGGA AGGCGGCGTG
GCGGTGCGCG TGATCGCCGG CGAGTCGCAT GGCGTGCAAG GCGCGATGAC GCGCGATGCG
ACGCAGCCGC TGTACCTGGA CCTCTCGCTG CCGGCGGGCA CGGCATTCGC GCAGCCGCTG
CCGGCGCGGC ACAACGCGTT CGTCTATGTG TTTCGCGGCA GCGCGCTGGT CGGCGATGCG
CAGGCGCCTG GCGGTGCCGG ACTGCAGCGC GTGGACGACA AGCAGATGGC CATCCTCGCC
AACACGGAAG GCAGCGACGG CGTGGTGATC CGCGCGGACG ATGCGCCGGC GCGCGTGCTG
CTGGTGGCCG GCCAGCCGCT GAACGAGCCG ATCGCGCAGT ACGGCCCGTT CGTGATGAAC
ACGCAGGAAG AGATCTTCCA GGCCGTGCGC GACTTCCAGG CCGGCAAGTT CGCCTGA
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| Protein sequence | MDTLVQPRVE HARRVERVVT GHATSDGAGV RLTRVLTQPL QRRLDPFLML DAFRSDDPND
YLAGFPDHPH RGFETVTYMI AGRMRHRDNA GHEGLLQTGG VQWMTAGSGI VHSEMPEQED
GVMEGFQLWL NLPARDKMTT PWYRDIPSAE IPGFTTEGGV AVRVIAGESH GVQGAMTRDA
TQPLYLDLSL PAGTAFAQPL PARHNAFVYV FRGSALVGDA QAPGGAGLQR VDDKQMAILA
NTEGSDGVVI RADDAPARVL LVAGQPLNEP IAQYGPFVMN TQEEIFQAVR DFQAGKFA
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