| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0529 |
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| Symbol | |
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| ID | 1219333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 567881 |
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| End bp | 568648 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236887 |
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| Product | unkown domain/putative metalloprotease fusion protein |
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| Protein accession | NP_518650 |
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| Protein GI | 17545248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0265894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0489009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAC CGAAGAAGAC CCAACCCGCC GCCACCGCCC CCCGCGTCGA CGTGTTCGAC
GCCAAGGGCA AGCCGAAGAC GGTGGACGCC AGCGCCCTGC GCATCGCCTT CGCCGACGGC
CGCAGCCTGC TCGTCAGCCT GCCGGACACG GCCGACGGCG CCATCACCCT GGTGGCCGAG
CACGCCGATG CCGCCACGCA CGCCATGCTG GCGCTGCGCC CCGAGCACCA CGACAGCATC
ACGCTGCGCA TCGAGGCCGA GCCGGCCGCC GAAGCGGAAG ACGCCGACGA CGCGCTGGCC
GGCGCCGAGA TGCTCACGCT GGACCTGACC GTGCAGCACG GCGACGCGCT CAAGGCCGCC
GCCCGCAAGG CACTCCCCAA GCAGAAGGAC ATCGAAGCGT GGATCGCGCC CGCGCTGTTC
GCCGATGCGC AGCTCAACGT GCGCTTCGTC GACGAGGAAG AAGGCCGCAC GCTCAACCAC
ACCTATCGCG GCAAGGACTA CGCCACCAAC GTGCTGACCT TCTCCTACGC GGAGACCGAA
GACGACCCGG TCGCCGCCGA CATCGTGCTG TGCTGCCCGG TGGTCGAGCA GGAAGCCAAG
GACCAGGGCA AGCCGCTGCG CGCCCACTAC GCGCACCTGA TCGTGCACGG CGCGCTGCAC
GCCCAGGGCT ACGACCATGA AGACCCGGCC CAAGCCGAAG AAATGGAAGG CATCGAGACC
GAGGTCCTCG CCGGGCTCGG TTTCCCCGAC CCGTACGCGG ACCGCTGA
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| Protein sequence | MAKPKKTQPA ATAPRVDVFD AKGKPKTVDA SALRIAFADG RSLLVSLPDT ADGAITLVAE
HADAATHAML ALRPEHHDSI TLRIEAEPAA EAEDADDALA GAEMLTLDLT VQHGDALKAA
ARKALPKQKD IEAWIAPALF ADAQLNVRFV DEEEGRTLNH TYRGKDYATN VLTFSYAETE
DDPVAADIVL CCPVVEQEAK DQGKPLRAHY AHLIVHGALH AQGYDHEDPA QAEEMEGIET
EVLAGLGFPD PYADR
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