Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0527 |
Symbol | lnt |
ID | 1219331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 565208 |
End bp | 566779 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236885 |
Product | apolipoprotein N-acyltransferase |
Protein accession | NP_518648 |
Protein GI | 17545246 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.776126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0299872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGCTT TGTTCTCCTC TCCTGCCGCC GACACCGCTG GCCAGCAGGA AGCCCTGGCC GTGCCGCTTG CCCGGCTGCG CTTTGCCGCG CCGCTGGCGG CGCTGCTGGG TGTCATGCAT ACGCTGGCCT TCGCGCCCAA CCGCTGGTGG TGGCTGCAGA TCCTGTCGCT GGCCGGGCTG GCGGCGCTGG TCCGGCAGGC ACCGCGCCTG CGCGACGTGG CCTGGGTCGG CTACGCCTTC GGGCTGGGCT GGTTCCTGTC GGGCATCTGG TGGCTGTACA TCAGCATGCA CGTCTACGGC GACATGCCGG CATGGATGGC CGCGGCCGCC GTGCTGCTGT TCTCGGCCTA CCTGGCCCTG CACCCGGCGC TCGCGGCATG GCTGTGGCAG CGCCTCGCGC GCGGCCGGCA GTTGTCCGGC GCGGCCAGCG CGCTCGTGTT CGGCGCGGCG TGGCTCGTCT CGGAATGGCT GCGCGGCACG GAATGGACGG GCTTCCCCTG GCTCAACGGC GGTTATGCCC ACACCGACGG TCCGCTGGCC GGCTATGCGC CGCTGGTCGG CGTGTATGGC GTCGTCGCGA TCGCCGCGAC GCTGGCCGGC CTGCTGTGCG CGGCCGCCGA GCGCCGGCTG CACTGGCTGG CCGGGCTCGC GGGCGTGGCC GTGCTGGCGG CCGGCTGGCC GCTGCACACC ATCGCGTGGA CCCAGCCGGT GGGCAAGCCG ATCACCGTGC GGCTGCTGCA GGGCAACGTG CCGCAGGACG TGAAGTTCCA GCAGACCGGC ATCGACCATT CGCTGGCGCT GTACACCAAG ATGGTGACCG AGCAGCCCGC CCAGTTGGTG GTGACGCCCG AGACGGCCTT CCCGATCCTG CTCCAGGACA TGCCGCAGGA GATCGCGCTG GCCATCCGCA CCTATGTGGA CACGACCGGC TCCAGCGTGC TGTTCGGCGC GGCCAACGCG GATTCGGCAG TGGACTACAC CAACAGCGCG TTCGGCGTCG GCCCGTGGTT CAAGGGGGTG TATCGCTACG ACAAGCACCA CCTCGTGCCC TTCGGCGAAT TCATCCCGTT CGGCTTCCAC TGGTTCGTCC ACATGATGAA CATGCCGCTC GGCGACTTCC GCCGCGGCCT GCCGGTGCAG CCGCCCATGC CGGTGGCCGG CCAGCGCGTC GCGCCCAACA TCTGCTACGA GGACTTGTTC GGCGAGGAGA TCGCCGCATC GCTGCGCCAG GCGGAACGGC CGGCCACGAT GCTCGCCAAC GTGACCAACC TGGCCTGGTT CGGCGACACC ATCGCGCTGG ACCAGCACCT GCAGATCTCG CGCATGCGGG CCCTGGAGAG CGGCCGGCCG ATGCTGCGCG CGACCAACAC CGGCGCCACC GCCGTGGTGC GTCCGGACGG CAGCGTGCAG GCGCGGCTGC CCGTGTTCAC GCTCGGCACG CTGCAGGCCG ACGTGCAGGG CATGCAGGGC CTGACGCCGT TCGTGCGGAC CGGCAACGCG CCCGCGCTGG GCGCCGGTGT GCTGGTGCTG CTGGCCGCGC TGGCGCGCCG CCGCCGCGCC GGAGCGGCGT AA
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Protein sequence | MRALFSSPAA DTAGQQEALA VPLARLRFAA PLAALLGVMH TLAFAPNRWW WLQILSLAGL AALVRQAPRL RDVAWVGYAF GLGWFLSGIW WLYISMHVYG DMPAWMAAAA VLLFSAYLAL HPALAAWLWQ RLARGRQLSG AASALVFGAA WLVSEWLRGT EWTGFPWLNG GYAHTDGPLA GYAPLVGVYG VVAIAATLAG LLCAAAERRL HWLAGLAGVA VLAAGWPLHT IAWTQPVGKP ITVRLLQGNV PQDVKFQQTG IDHSLALYTK MVTEQPAQLV VTPETAFPIL LQDMPQEIAL AIRTYVDTTG SSVLFGAANA DSAVDYTNSA FGVGPWFKGV YRYDKHHLVP FGEFIPFGFH WFVHMMNMPL GDFRRGLPVQ PPMPVAGQRV APNICYEDLF GEEIAASLRQ AERPATMLAN VTNLAWFGDT IALDQHLQIS RMRALESGRP MLRATNTGAT AVVRPDGSVQ ARLPVFTLGT LQADVQGMQG LTPFVRTGNA PALGAGVLVL LAALARRRRA GAA
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