| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0526 |
|---|
| Symbol | glyQ |
|---|
| ID | 1219330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 564077 |
|---|
| End bp | 565054 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637236884 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | NP_518647 |
|---|
| Protein GI | 17545245 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0481325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCT TCCAGCAACT CATCCTCAAG CTGCAGTCGT ACTGGGACGC CCAGGGCTGC
GCGCTGCTGC AGCCGATCGA CCTCGAAGTC GGTGCCGGCA CCTCGCACGT CCACACCTTC
CTGCGCGCCA TCGGCCCGGA GCCGTGGCGC GCCGCCTACG TGCAGCCGTC GCGCCGTCCC
AAGGACGGCC GCTACGGCGA GAACCCCAAC CGCCTGCAGC ACTACTACCA GTACCAGGTG
GTGCTCAAGC CCGCGCCCGA GAACATCCTC GACCTATACC TCGGCTCGCT CCAGGCGCTA
GGGCTGGACC TCAAGCAGAA CGACGTGCGC TTCGTCGAGG ACGACTGGGA AAACCCCACG
CTCGGCGCCT GGGGCCTGGG CTGGGAAGTC TGGCTCAACG GCATGGAAGT CACGCAGTTC
ACCTACTTCC AGCAGGTCGG CGGCCTCGAC TGCAAGCCCA TCACGGGCGA AATCACCTAC
GGCATCGAGC GCCTGGCGAT GTACCTGCAG CAGGTCGAGA ACGTCTACGA CCTGGTCTGG
ACGGAGTGGG AAGAACCGGG CCCCAACGGC CCCGTCAAGC GCCGCCTGAC CTACGGCGAC
GTCTATCACC AGAACGAAGT CGAGCAGTCG ACGTACAACT TCGAGCACGC GGATACGGCC
GTGCTGTTCC GCCGCTTCGC AGAACACGAG GCGGAGGCCA AGCGCCTGAT GGGCGTGCGC
GAAGAAGGCG CGGCCGACGA CGGCGCAGCG GTGCCGCAGC TGGCGCTGCC CGCCTACGAG
CAGGTGCTCA AGGCCGGCCA CACCTTCAAC CTGCTGGACG CGCGCGGCGC CATCTCGGTG
ACCGAGCGCG CCGCCTACAT CGGCCGCATC CGCAACCTGT CGCGGCTGGT GGCGCAGGCC
TACTACGACT CGCGCGAGCG CCTGGGCTTC CCGATGTGCG GCACGGCCGC GGCGCCGGCG
GCCACGGAGG CCGCATGA
|
|---|
| Protein sequence | MLTFQQLILK LQSYWDAQGC ALLQPIDLEV GAGTSHVHTF LRAIGPEPWR AAYVQPSRRP
KDGRYGENPN RLQHYYQYQV VLKPAPENIL DLYLGSLQAL GLDLKQNDVR FVEDDWENPT
LGAWGLGWEV WLNGMEVTQF TYFQQVGGLD CKPITGEITY GIERLAMYLQ QVENVYDLVW
TEWEEPGPNG PVKRRLTYGD VYHQNEVEQS TYNFEHADTA VLFRRFAEHE AEAKRLMGVR
EEGAADDGAA VPQLALPAYE QVLKAGHTFN LLDARGAISV TERAAYIGRI RNLSRLVAQA
YYDSRERLGF PMCGTAAAPA ATEAA
|
|---|
| |