Gene RSc0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0509 
SymbolpepP 
ID1219313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp544431 
End bp545807 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content72% 
IMG OID637236867 
ProductXAA-Pro aminopeptidase 
Protein accessionNP_518630 
Protein GI17545228 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.13437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CCGAACTCGC CTTCCTCCAG ACCACCCGCC AGCGCCGCGA GCGCATCGCG 
CAATGGCTGC GCGCGGCGGG CGGCGGCGTC GCCATCGTCC CGACCGCACC GGAAACCATG
CGCAACCGCG ACAGCGACTA CCCCTACCGG CACGACAGCT ACTTCTACTA CCTGACCGGC
TTCACCGAGC CCGAGGCGGT GCTGGCCATC GTGGTGCCGG CCGGCGGCGC GCCGGCGCGC
AGCGTGCTGT TCTGCCGCCC CAAGCACGAG GAGCGCGAAA TCTGGGACGG CTTCCGCTTC
GGCCCCGAAG CCGCCCGGGA AGCCTTCGGC CTGGACGAAG CGCATTCGGT CGACGAGATC
GACGCGACGC TGCCGGGCCT GCTCGCCAAT GCGGCCGCCG TGGCCTATCC GCTGGCCGAG
ACCGGCGTCT TCGACCGCCG CATGCGCCGC TGGCTCGACG CCGTGCGCAT GCAGGGCCGC
GCCGGCGTGT CGGCGCCGCA CCAGGCGCTG GACGTGCGCG CCATCCTCGA CGAGATGCGC
CTGTTCAAGG ACGCGGGCGA GCTCGACATC ATGCGCCGCG CCGCGCGCAT CTCCGCCGGG
GCGCATGTGC GCGCCATGCG GACCTCGCGC GCCGGCCTGC GCGAGTACCA CCTCGAGGCC
GAGCTGCTCT ACGAATTCCG CCGCCACGGC GCGCAGAGCG TCGCCTACAA CTCCATCGTC
GCCACCGGGC CAAATGCCTG CGTGCTGCAC TACCGCGCCG GCAATGCCGA GCTGCGCGAC
GGCGACCTGT GCCTGATCGA TGCCGGCTGC GAGCTCGACG GCTATGCCTC CGACATCACC
CGCACCTTCC CCGTCAACGG GCGCTTCTCC GGCCCGCAGC GCGCGCTCTA CGACCTCGTG
GTGGCCGCGC AGGAGGCCGC CATCGCGCAA ACCCGGCCGG GCGTCCCGTA CAACGTGCCG
CACGATGCCG CCACGCGCGT GCTGGCGCAG GGCATGCTCG ACACCGGCCT GCTGGACGCG
AACCGGGTCG GCACGCTCGA CGACGTGCTC GCCGGCGGCC AGTACCGCCA GTTCTACATG
CACCGCACCG GCCACTGGCT GGGCATGGAC GTGCACGACG TGGGCGAATA CCGTACGCCC
GGCGCGGCGC CCGTCCAGGG CGAGCGCCCG TGGCGCCCGC TCGAGGCCGG CATGGTGCTG
ACCGTCGAGC CCGGCCTCTA CGTGCGTCCA GCGCCGGACG TGCCTGAGGC GTTCTGGCAC
ATCGGCATCC GCATCGAGGA CGATGCCATC GTCACGCCGC AGGGCTGCGA GCTGATCACG
CGCGATGTGC CGGTGGCCGC GGACGACATC GAAGCGCTGA TGCGCAGCCA GGCATGA
 
Protein sequence
MSATELAFLQ TTRQRRERIA QWLRAAGGGV AIVPTAPETM RNRDSDYPYR HDSYFYYLTG 
FTEPEAVLAI VVPAGGAPAR SVLFCRPKHE EREIWDGFRF GPEAAREAFG LDEAHSVDEI
DATLPGLLAN AAAVAYPLAE TGVFDRRMRR WLDAVRMQGR AGVSAPHQAL DVRAILDEMR
LFKDAGELDI MRRAARISAG AHVRAMRTSR AGLREYHLEA ELLYEFRRHG AQSVAYNSIV
ATGPNACVLH YRAGNAELRD GDLCLIDAGC ELDGYASDIT RTFPVNGRFS GPQRALYDLV
VAAQEAAIAQ TRPGVPYNVP HDAATRVLAQ GMLDTGLLDA NRVGTLDDVL AGGQYRQFYM
HRTGHWLGMD VHDVGEYRTP GAAPVQGERP WRPLEAGMVL TVEPGLYVRP APDVPEAFWH
IGIRIEDDAI VTPQGCELIT RDVPVAADDI EALMRSQA