Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0509 |
Symbol | pepP |
ID | 1219313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 544431 |
End bp | 545807 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236867 |
Product | XAA-Pro aminopeptidase |
Protein accession | NP_518630 |
Protein GI | 17545228 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.13437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CCGAACTCGC CTTCCTCCAG ACCACCCGCC AGCGCCGCGA GCGCATCGCG CAATGGCTGC GCGCGGCGGG CGGCGGCGTC GCCATCGTCC CGACCGCACC GGAAACCATG CGCAACCGCG ACAGCGACTA CCCCTACCGG CACGACAGCT ACTTCTACTA CCTGACCGGC TTCACCGAGC CCGAGGCGGT GCTGGCCATC GTGGTGCCGG CCGGCGGCGC GCCGGCGCGC AGCGTGCTGT TCTGCCGCCC CAAGCACGAG GAGCGCGAAA TCTGGGACGG CTTCCGCTTC GGCCCCGAAG CCGCCCGGGA AGCCTTCGGC CTGGACGAAG CGCATTCGGT CGACGAGATC GACGCGACGC TGCCGGGCCT GCTCGCCAAT GCGGCCGCCG TGGCCTATCC GCTGGCCGAG ACCGGCGTCT TCGACCGCCG CATGCGCCGC TGGCTCGACG CCGTGCGCAT GCAGGGCCGC GCCGGCGTGT CGGCGCCGCA CCAGGCGCTG GACGTGCGCG CCATCCTCGA CGAGATGCGC CTGTTCAAGG ACGCGGGCGA GCTCGACATC ATGCGCCGCG CCGCGCGCAT CTCCGCCGGG GCGCATGTGC GCGCCATGCG GACCTCGCGC GCCGGCCTGC GCGAGTACCA CCTCGAGGCC GAGCTGCTCT ACGAATTCCG CCGCCACGGC GCGCAGAGCG TCGCCTACAA CTCCATCGTC GCCACCGGGC CAAATGCCTG CGTGCTGCAC TACCGCGCCG GCAATGCCGA GCTGCGCGAC GGCGACCTGT GCCTGATCGA TGCCGGCTGC GAGCTCGACG GCTATGCCTC CGACATCACC CGCACCTTCC CCGTCAACGG GCGCTTCTCC GGCCCGCAGC GCGCGCTCTA CGACCTCGTG GTGGCCGCGC AGGAGGCCGC CATCGCGCAA ACCCGGCCGG GCGTCCCGTA CAACGTGCCG CACGATGCCG CCACGCGCGT GCTGGCGCAG GGCATGCTCG ACACCGGCCT GCTGGACGCG AACCGGGTCG GCACGCTCGA CGACGTGCTC GCCGGCGGCC AGTACCGCCA GTTCTACATG CACCGCACCG GCCACTGGCT GGGCATGGAC GTGCACGACG TGGGCGAATA CCGTACGCCC GGCGCGGCGC CCGTCCAGGG CGAGCGCCCG TGGCGCCCGC TCGAGGCCGG CATGGTGCTG ACCGTCGAGC CCGGCCTCTA CGTGCGTCCA GCGCCGGACG TGCCTGAGGC GTTCTGGCAC ATCGGCATCC GCATCGAGGA CGATGCCATC GTCACGCCGC AGGGCTGCGA GCTGATCACG CGCGATGTGC CGGTGGCCGC GGACGACATC GAAGCGCTGA TGCGCAGCCA GGCATGA
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Protein sequence | MSATELAFLQ TTRQRRERIA QWLRAAGGGV AIVPTAPETM RNRDSDYPYR HDSYFYYLTG FTEPEAVLAI VVPAGGAPAR SVLFCRPKHE EREIWDGFRF GPEAAREAFG LDEAHSVDEI DATLPGLLAN AAAVAYPLAE TGVFDRRMRR WLDAVRMQGR AGVSAPHQAL DVRAILDEMR LFKDAGELDI MRRAARISAG AHVRAMRTSR AGLREYHLEA ELLYEFRRHG AQSVAYNSIV ATGPNACVLH YRAGNAELRD GDLCLIDAGC ELDGYASDIT RTFPVNGRFS GPQRALYDLV VAAQEAAIAQ TRPGVPYNVP HDAATRVLAQ GMLDTGLLDA NRVGTLDDVL AGGQYRQFYM HRTGHWLGMD VHDVGEYRTP GAAPVQGERP WRPLEAGMVL TVEPGLYVRP APDVPEAFWH IGIRIEDDAI VTPQGCELIT RDVPVAADDI EALMRSQA
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