| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0474 |
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| Symbol | |
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| ID | 1219278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 507270 |
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| End bp | 509753 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236832 |
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| Product | putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518595 |
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| Protein GI | 17545193 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCGAACTCCC GACCACCCAG GCGCAGCCGC AGGCCGGCGC GCGCTCCAAC
TTCCTCGTCC GGCGCGTGGC CGTGCTGGGC GCCGGCGTGA TGGGCGCGCA GATCGCCGCG
CACCTGGTCA ACGCCAAGGT TCCCGTCACG CTGTTCGATC TCCCGGCCAA GGATGGCCTG
AAGAACGGCA TCGTGCTCAA GGCCATCGAG CATCTGAAGA AGCTGTCGCC GGCGCCGCTG
GGCGTCAAGG ACGACGCGGC CCTGATCCAG ATCGCCAACT ACGAGGACGA CATCGAGCGC
CTGCGCGACT GCGACCTCGT CATCGAGGCC ATCGCCGAGC GCATGGACTG GAAGCACGAC
CTGTACAAGA AGGTCGCGCC GCACATCGCG CCGCATGCGA TCTTCGCCTC CAACACCTCG
GGCCTGTCGA TCGGCGCGCT GTCGGACGGC TTCGACGCCG AGCTGAAGTC GCGCTTCTGC
GGCGTGCACT TCTTCAATCC GCCGCGCTAC ATGCACCTGG TCGAGCTGAT CCCGACCGCC
CACACGCGCG GCGACATCCT CGACAAGCTG GAAACCTTCC TGACCTCCGC GCTCGGCAAG
GGCGTGGTGC GCGCCAAGGA CACCCCGAAC TTCATCGCCA ACCGGGTCGG CATCTTTTCG
ATCCTGGCGG TGTTCGCGGA GTCGGCCAAG TACGGTATCC CGTTCGACGT GGTGGATGAC
CTGACGGGCT CGAAGCTGGG CCGCGCCAAG TCGGCCACGT TCCGCACGGC CGATGTGGTG
GGCCTGGACA CCATGGCGCA CGTCATCAAG ACGATGCAGG ACACGCTGAA GGACGATCCG
TTCGCCCCGG TCTATGCCAC GCCGCCCGTG CTGGCCCGGC TGGTGGAGGC GGGCGCCCTG
GGCCAGAAGA CCGGCGCCGG CTTCTACAAG AAGGAAGGCA AGGACATCAA GGTGCTGGAC
CCGCAGAGCG GCCAGTACGG CCCGAGCGGC AAGAAGGCCG ACGAGATCGT CGTGCGCATC
CTGAAGAAGG CGCCGGCCGA GCGCCTGAAG CTGCTGCGCG AATCGACCAA TCCGCAGGCG
CAGTTCCTGT GGGCGGTGTT CCGCGACGTG TTTCACTACA TCGCCGTATA CCTGGAGCAG
ATCGCCGATT CGGCCGCGGA AGTCGACCTG GCGATCCGCT GGGGCTTCGG CTGGAACAGC
GGCCCGTTCG AAGACTGGCA GCAGGCCGGC TGGAAGCAGG TGGCCGAGTG GGTGAAGGAA
GACATCGATG CGGGCAAGGC GCTCGCGAAC GCGCCGCTGC CGCAGTGGGT GTTCGCGGGC
CCGGTGGCCG ACAACGGCGG CGTGCATGCG GCGCAGGGCT CGTGGTCGGC GTCGCAGGGC
AGCTTCCTGG CGCGCAGCAC GCTGCCGGTC TATGGCCGCC AGGTGTTCCG CGCGGCGATC
CAGGGCGCCA CCACGGTCGA CCCGCTCACC CACGGCAAGA CCATCGAAGA GACCGACGCC
GTGCGCATCT GGGTGGACGA CGCGGCCGGC CAGGACGACG TGCTAGTGCT CTCGTTCAAG
AGCAAGATGA ACACCATCGG CCCGAGCGTG ATCGCGGGCA TCGTGCGCGC CATCGACCTG
GCCGAAGCCG GCTACAAGGG GCTGGTGGTG TGGCAGCCGA CCTCGCTCAA GCTGGGCGCG
CCGGGCGGTC CGTTCTCGGC GGGCGCGAAC CTGGAAGAGG CCATGCCGGC TTTCATGATG
GGCGGCGCCA AGGGCATCGA GCCGTTCGTC AAGACGTTCC AGGACGGCAT GATGCGGGTG
AAGTACGCTA ACGTGCCGGT CGTCTCGGCG GCGTCGGGCA TCGCGCTGGG CGGCGGCTGC
GAGCTGCTGC TGCACTCGGC CAAGCGCGTG GCGGCCTTCG AGACCTACAT CGGCCTGGTG
GAAGTGGGCG TGGGCCTGGT GCCGGCCGGC GGCGGCCTGA AGGAAGCCGC GCTGGCGGCC
GCGCGGGCGG CGGAGGCGGC GGGCAGCACC AACCTGCTGC CGTTCCTGAC CAGCCGCTTC
CAGTTCGCAG CCATGGCCAA AGTATCGAGC TCGGCGCTGG ACGCGCAGAA GCTCGGCTAC
CTGCAGCCGA CCGACACCAT CGTCTTCAAC GTGCACGAGC TGCTGCACGT GGCGCGCAAT
GAAGTGCGCG CGCTGGCCGA TGCCGGCTAC CGCGCGCCGA TGCGTCCGGC GGGCATCCCG
GTGGCGGGCC GGTCGGGCAT CTCGACCATC AAGGCCTCGC TGGTGAACAT GCGCGATGGC
GGCTTCATCT CGCAGCACGA CTTCACGATC GCCTCGCGCA TCGCCGAGGC CGTGTGCGGC
GGCGACGTGG AAGCCGGCGC GCTGGTGGAC GAGGAATGGC TGCTGGCCCT CGAGCGCAAG
GCGTTCGTCG AGCTGCTCGG CACGGCCAAG ACCCAGGAGC GCATCATGGG CATGCTGCAG
ACCGGTAAGC CGGTGCGCAA CTGA
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| Protein sequence | MTRTELPTTQ AQPQAGARSN FLVRRVAVLG AGVMGAQIAA HLVNAKVPVT LFDLPAKDGL
KNGIVLKAIE HLKKLSPAPL GVKDDAALIQ IANYEDDIER LRDCDLVIEA IAERMDWKHD
LYKKVAPHIA PHAIFASNTS GLSIGALSDG FDAELKSRFC GVHFFNPPRY MHLVELIPTA
HTRGDILDKL ETFLTSALGK GVVRAKDTPN FIANRVGIFS ILAVFAESAK YGIPFDVVDD
LTGSKLGRAK SATFRTADVV GLDTMAHVIK TMQDTLKDDP FAPVYATPPV LARLVEAGAL
GQKTGAGFYK KEGKDIKVLD PQSGQYGPSG KKADEIVVRI LKKAPAERLK LLRESTNPQA
QFLWAVFRDV FHYIAVYLEQ IADSAAEVDL AIRWGFGWNS GPFEDWQQAG WKQVAEWVKE
DIDAGKALAN APLPQWVFAG PVADNGGVHA AQGSWSASQG SFLARSTLPV YGRQVFRAAI
QGATTVDPLT HGKTIEETDA VRIWVDDAAG QDDVLVLSFK SKMNTIGPSV IAGIVRAIDL
AEAGYKGLVV WQPTSLKLGA PGGPFSAGAN LEEAMPAFMM GGAKGIEPFV KTFQDGMMRV
KYANVPVVSA ASGIALGGGC ELLLHSAKRV AAFETYIGLV EVGVGLVPAG GGLKEAALAA
ARAAEAAGST NLLPFLTSRF QFAAMAKVSS SALDAQKLGY LQPTDTIVFN VHELLHVARN
EVRALADAGY RAPMRPAGIP VAGRSGISTI KASLVNMRDG GFISQHDFTI ASRIAEAVCG
GDVEAGALVD EEWLLALERK AFVELLGTAK TQERIMGMLQ TGKPVRN
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