| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0473 |
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| Symbol | |
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| ID | 1219277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 505405 |
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| End bp | 507192 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637236831 |
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| Product | putative acyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518594 |
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| Protein GI | 17545192 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.390432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAAT ACACCGCACC GTTGCGCGAT ATGCAGTTCG TCCTTCATGA GCTTCTCGAT
GTCGAGGGGC ATCTGAAGGC GATGCCGGCG CATGCGGAGA TCGACGCCGA TACCATCAAC
CAGGTGATCG AAGAAGCCGG CAAGTTCTGC TCGGAAGTCA TCTTCCCGCT CAACCAGTCG
GGCGATCGCG AGGGCTGCAC CTACCACGGC GACGGCGTCG TGACGGCCCC CAAGGGCTTC
AAGGAAGCGT ACAAGCAATA CGTCGAAGGC GGCTGGCCGG CGCTGGGCTG CGATCCGGAA
TTCGGCGGCC AGGGCCTGCC GATCCTGGTC AACAACGCCG TCTACGAGAT GCTGAACTCG
GCCAACCAGG CGTGGACGAT GTACCCCGGC CTGTCGCACG GCGCCTACGA GGCCCTGCAC
GCGCACGGCA CGGATGAACT CAAGCAGCGC TACCTGCCCA AGCTGGTGTC GGGCGAGTGG
ACCGGCACGA TGTGCCTGAC CGAGCCGCAT TGCGGCACCG ACCTCGGCAT CCTGCGCACC
AGGGCCGAGC CGCTGGCCGA CGGCGCGTAC GCCATCACCG GCACGAAGAT CTTCATCTCG
GCGGGCGAGC ACGACCTGTC GGACAACATC ATCCACCTGG TGCTGGCCCG CCTGCCGGAT
GCGCCGGCCG GCACCAAGGG CATCTCGCTG TTCGTGGTGC CGAAGTTCAT CCCCGATGCC
GCCGGCAACC CGGGCGAGCG CAACGGCGTG AAGTGCGGCT CCATCGAGCA CAAGATGGGC
ATCCACGGCA ACGCCACCTG CGTGATCAAC CTGGACGGCG CGCGCGGCTG GATGGTCGGC
GAGCCGAACA AGGGCCTGAA CGCCATGTTC GTGATGATGA ACGCCGCCCG CCTGGGCGTC
GGCATGCAGG GCCTGGGCCT GACGGAAGTG GCCTACCAGA ACTCGGCGGC CTACGCCAAG
GAGCGCCTGC AGATGCGCAG CCTCTCCGGC CCGAAGGCGC CGGACAAGCC GGCCGACCCC
ATCATCGTGC ACCCGGATGT GCGCCGCATG CTGCTGACCC AGCGCGCCTA CGCCGAGGGC
GGCCGCGCCT TCGCCTACTG GATCGCGCTG CAGATCGACC GCGAGCTGTC GCACCCGGAC
GAATCGGTGC GCAAGGAGGC CGCCGATCTC GTCGCGCTGC TCACGCCCGT CATCAAGGCC
TTCCTGACCG ACAACGCCTT CACCGCCACC AACGAGGGCA TGCAGGTGTT CGGCGGCCAC
GGCTATATTG CCGAGTGGGG CATGGAGCAG TACGTGCGCG ATGCCCGCAT CAACATGATC
TACGAAGGCA CGAACACTGT GCAGTCGCTG GACCTGCTGG GCCGCAAGAT CCTGGGCGAC
ATGGGCGCCA AGATGAAGAA GTTCGGCAAG ATCGTGCAGG ACTTCGTCGA GGCCGAAGGC
ACCAATGAGG CCATGCAGGA ATTCGTCAAC CCGCTGGCCG ACATCGGCGA CAAGGTCCAG
AAGCTGACCA TGGAGATCGG CATGAAGGCG ATGGCGAACC CGGATGAAGT CGGCGCCGCC
GCCGTGCCGT ACCTGCGCGT GGTCGGTCAC CTGGTGTTCG CCTACTTCTG GGCCCGCATG
GCCAAGCTCG CGCTGGACAA GCAGGGCAAC GGCGACACCT TCTACAAGGC CAAGCTGGCG
ACGGCGCGCT TCTACTTCGC CAAGCTGCTG CCCGAGACGG CGTACCAGAT CCGCGCCGCG
CGCACGGGCG TCAAGCCGCT GATGGACCTC GAAGCCGAGC TGTTCTGA
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| Protein sequence | MGQYTAPLRD MQFVLHELLD VEGHLKAMPA HAEIDADTIN QVIEEAGKFC SEVIFPLNQS
GDREGCTYHG DGVVTAPKGF KEAYKQYVEG GWPALGCDPE FGGQGLPILV NNAVYEMLNS
ANQAWTMYPG LSHGAYEALH AHGTDELKQR YLPKLVSGEW TGTMCLTEPH CGTDLGILRT
RAEPLADGAY AITGTKIFIS AGEHDLSDNI IHLVLARLPD APAGTKGISL FVVPKFIPDA
AGNPGERNGV KCGSIEHKMG IHGNATCVIN LDGARGWMVG EPNKGLNAMF VMMNAARLGV
GMQGLGLTEV AYQNSAAYAK ERLQMRSLSG PKAPDKPADP IIVHPDVRRM LLTQRAYAEG
GRAFAYWIAL QIDRELSHPD ESVRKEAADL VALLTPVIKA FLTDNAFTAT NEGMQVFGGH
GYIAEWGMEQ YVRDARINMI YEGTNTVQSL DLLGRKILGD MGAKMKKFGK IVQDFVEAEG
TNEAMQEFVN PLADIGDKVQ KLTMEIGMKA MANPDEVGAA AVPYLRVVGH LVFAYFWARM
AKLALDKQGN GDTFYKAKLA TARFYFAKLL PETAYQIRAA RTGVKPLMDL EAELF
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