Gene RSc0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0466 
SymbolaspS 
ID1219270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp497213 
End bp499030 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content65% 
IMG OID637236824 
Productaspartyl-tRNA synthetase 
Protein accessionNP_518587 
Protein GI17545185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTC AATATTGCGG TCAGGTCACC GAACAACTGC TGGGCCAGAG CGTCACCCTG 
TCGGGCTGGG CGCATCGCCG GCGTGACCAC GGCGGCGTGA TCTTCATCGA CCTGCGCGAT
CGCGAGGGCC TGGTGCAGGT GGTGTGCGAT CCGGACCGTC CGGAGATGTT CAAGGTGGCC
GAAGGCGTGC GCAACGAGTT CTGCCTGCAG GTCAAGGGCA TCGTGCGTGC GCGTCCGGAA
GGCACGACCA ACCCGAACCT AGCCAGCGGC AAGATCGAGG TGCTGTGCCA TGAGCTGACG
GTGCTCAACG CCTCCGTCAC GCCGCCGTTC CAGCTCGACG ACGACAACCT GTCGGAAACC
ACGCGCCTGA CGCACCGCGT GCTGGACCTG CGCCGCCCGC AGATGCAATA CAACCTGCGC
CTGCGCTACA AGGTGGCGAT GGAAGTGCGC AAGTACCTGG ACGACAAGGG CTTCATCGAC
ATCGAAACGC CGATGCTGAC CAAGAGCACG CCGGAAGGCG CGCGCGACTA CCTGGTGCCG
TCGCGCGTGA ACGCCGGCCA GTTCTTCGCG CTGCCGCAGT CGCCGCAGCT GTTCAAGCAG
ATGCTGATGG TGTCGGGCTT CGACCGCTAC TACCAGATCA CCAAGTGCTT CCGCGACGAA
GACCTGCGCG CTGACCGCCA GCCCGAATTC ACCCAGATCG ACTGCGAAAC GTCGTTCCTG
AGCGAGCAGG AAATCCGCGA TCTGTTTGAA GAAATGATCC GCACGGTGTT CCAGAACACC
ATGTCGGTCG CGCTGGATGC CAAGTTCCCG GTGATGGAGT TCCGCGAGGC GATGGCCCGC
TTCGGTTCGG ACAAGCCGGA CCTGCGCGTG AAGCTGGAGT TCACCGAGCT GACCGACGCC
ATGAAAGACG TCGACTTCAA GGTGTTCTCC GGCCCGGCCA ACGCCGAAGG CGGCCGCGTG
GTGGCGCTGC GTGTGCCGGG CGGTGCTGCC CTGTCGCGTG GTGACATCGA CGCCTACACC
AAGTTCGTCG AGATCTACGG CGCCAAGGGC CTGGCCTGGA TCAAGGTCAA CGAAGTGGCC
AAGGGCCGCG ACGGCCTGCA ATCGCCGATC GTGAAGAACC TGCACGACGC GGCCATCGCC
GAGATCCTCA AGCGTAGCGG CGCGCAAGAC GGCGACATCC TGTTCTTCGG CGCCGACCGC
GCCAAGGTCG TCAACGACGC CATGGGCGCG CTGCGCCTGA AGGTGGGCCA TTCGGACTTC
GCCAAGAGCA CCGGCCTGTT CGAAGACGCC TGGAAGCCGC TGTGGGTGGT CGACTTCCCG
ATGTTCGAGT ACGACGAGGA AGACGCGCGC TGGGTGGCCA TGCACCACCC GTTCACGAGT
CCGAAGGACG AGCACCTGGA ATACCTGGAA ACCGATCCGG GCAAGTGCAT CGCCAAGGCC
TACGACATGG TGCTCAACGG CTGGGAAATC GGTGGCGGCT CGGTGCGGAT CTACCGCGAA
GAAGTGCAGA GCAAGGTGTT CCGCGCCCTG AAGATCGGTG ATGAAGAAGC GCGTGCCAAG
TTCGGCTTCC TGCTGGACGC CCTGCAGTAT GGCGCGCCCC CGCACGGCGG CATTGCGTTC
GGCCTGGACC GCGTTGTCAC GATGATGGCC GGCGCCGACT CGATCCGCGA CGTGATCGCC
TTCCCGAAGA CGCAGCGTGC GCAGGATCTG CTCACGCAGG CGCCGAGCCC GGTCGACGAG
AAGCAGCTGC GCGAACTGCA CATCCGCCTG CGCGCGGCGG AGGCCAAGGT CGCCGCGCCG
GCGGCGGCCA CGGCCTGA
 
Protein sequence
MRTQYCGQVT EQLLGQSVTL SGWAHRRRDH GGVIFIDLRD REGLVQVVCD PDRPEMFKVA 
EGVRNEFCLQ VKGIVRARPE GTTNPNLASG KIEVLCHELT VLNASVTPPF QLDDDNLSET
TRLTHRVLDL RRPQMQYNLR LRYKVAMEVR KYLDDKGFID IETPMLTKST PEGARDYLVP
SRVNAGQFFA LPQSPQLFKQ MLMVSGFDRY YQITKCFRDE DLRADRQPEF TQIDCETSFL
SEQEIRDLFE EMIRTVFQNT MSVALDAKFP VMEFREAMAR FGSDKPDLRV KLEFTELTDA
MKDVDFKVFS GPANAEGGRV VALRVPGGAA LSRGDIDAYT KFVEIYGAKG LAWIKVNEVA
KGRDGLQSPI VKNLHDAAIA EILKRSGAQD GDILFFGADR AKVVNDAMGA LRLKVGHSDF
AKSTGLFEDA WKPLWVVDFP MFEYDEEDAR WVAMHHPFTS PKDEHLEYLE TDPGKCIAKA
YDMVLNGWEI GGGSVRIYRE EVQSKVFRAL KIGDEEARAK FGFLLDALQY GAPPHGGIAF
GLDRVVTMMA GADSIRDVIA FPKTQRAQDL LTQAPSPVDE KQLRELHIRL RAAEAKVAAP
AAATA