| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0457 |
|---|
| Symbol | |
|---|
| ID | 1219261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 488695 |
|---|
| End bp | 489111 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637236815 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518578 |
|---|
| Protein GI | 17545176 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.82157 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAC TCACCGCCGA CACTCCGCAG CCGACCGGCA TCACGGTGCA CACGCAATCG
CGCGTGCTCG AGATCGTCTT CGCCGACGGC AAGCAGTTCC GCCTGCCGTT CGAATACCTG
CGCGTGCTGT CGCCGTCGGC CGAAGTGCAG GGGCATGGGC CGGGGCAGGA GGTGTTGCAG
ACCGGCAAGC GCGAGGTCGG CATCGTCGGC GTGGAGCCGG TCGGCAACTA CGCGATCCGC
CCGCTGTTCT CCGATGGCCA TGATTCCGGC ATCTACGACT GGGCCTATCT GTACCGCCTC
GGCGCCGAGC AGGACGCGCT GTGGCAGGCC TATCTCGATC GCCTCGCCGC CGCGGGCCTC
GACCGCGACG CACCGATGGC GCCCGGCGCC GGCCATGCCT GCGGCCACGG CCACTGA
|
|---|
| Protein sequence | MAGLTADTPQ PTGITVHTQS RVLEIVFADG KQFRLPFEYL RVLSPSAEVQ GHGPGQEVLQ
TGKREVGIVG VEPVGNYAIR PLFSDGHDSG IYDWAYLYRL GAEQDALWQA YLDRLAAAGL
DRDAPMAPGA GHACGHGH
|
|---|
| |