| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0454 |
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| Symbol | |
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| ID | 1219258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 482259 |
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| End bp | 486296 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236812 |
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| Product | putative oxidoreductase protein |
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| Protein accession | NP_518575 |
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| Protein GI | 17545173 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.306454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CACTGCTGAT CGACGCCAAA CTCGCGGCGC AGGACGCCGC GCCACGGCTG
CGCGAGATTC CCTATAACTA CACCTCGTTC TCGGATCGGG AAATCGTCAT TCGTCTGCTG
GGCGAGTCTG CGTGGCAGAT CCTCGACGAG CTGCGCAGCG AACGCCGCAC TGGCCGCTCC
GCGCGGATGC TGTACGAAGT GCTGGGCGAC ATCTGGGTGG TGCGCCGCAA TCCGTACCTG
CAGGACGACC TGCTCGACAA TCCCAAGCGC CGGCAGATGC TGATCGACGC GCTCAATCAC
CGCCTGGCGG AGATCGAGAA GCGCCGCACC GCCGACCAGA CCGCGCACAA CGACCCGGAA
AGCGATGAGC GCTCCCGCAA GGTCGAGCAG CTGGTCGTGC ACGCGCGCCG CGCCGTCAAG
GCCTTCGAGG ACGAATTCGC CCAGGTGTAC GACCTGCGCC GCCGCGCCCA GAAGGTGCTC
GGCCGCGTGA CCGCCAAGGA CAACATCAAG TTCGACGGCC TGTCGCGCGT GTCGCACGTC
ACCGACGCCA CCGACTGGCG CGTCGAGTAC CCGTTCGTGG TGCTGGCGCC GGACACGGAA
GACGAGGTGG CCGGCATCGT CAAGGGCTGC TTCGAGCTTG GCCTGACCAT CATCCCGCGC
GGAGGCGGCA CCGGCTACAC CGGCGGCGCC GTGCCGCTGA CGCCGTTCTC GGCCGTCATC
AACACCGAGA AGCTGGAGCG CCTGGATGCG GTCGAGATGA CCGACCTGCC CGGCGTCGAC
CACCCCGTCG CCACCATCTA TTCGGCCGCC GGCGTGGTGA CGCGCCGCGT GGCGGAGGCC
GCCGAGCGCG CCGGTCTCGT CTTCGCGGTG GACCCGACCT CGATCGACGC CTCGTGCATC
GGCGGCAACG TCGCCATGAA CGCGGGCGGC AAGAAGGCCG TGCTGTGGGG CACCGCGCTG
GACAACCTGG CCTGGTGGCG CATGGTCGAT CCGGACGGCA ACTGGCTCGA AGTCACGCGC
CTGGACCACA ACCTGGGCAA GATCCACGAC GCGCCGGTCG CCACCTTCGA GCTGAAGTGG
TTCGACGGCA ACGCGCCCGT GGGCAGCAAG CCGCTGCGCA CCGAGTCGCT CACCATCGAA
GGCCGCAAGT TCCGCAAGGA AGGCCTCGGC AAGGACGTCA CCGACAAGTT CCTGGCCGGC
CTGCCCGGCG TGCAGAAGGA AGGCTGCGAC GGCATCATCA CCAGCGCGCG CTGGGTCCTG
CACCGCATGC CCAAGTCGAT CCGCACCGTG TGCCTGGAGT TCTTCGGCCA GGCGCGCGAC
GCGATCCCGA GCATCGTCGA GATCAAGGAC TACCTCGACG CCGAGACCAA GAAACCCGGC
GGCGCCATCC TGGCCGGCCT GGAGCACCTG GACGAGCGCT ACCTGCGCGC GGTCGGCTAT
GCCACCAAGA GCAAGCGCAA CGCCTTCCCG AAGATGGTGC TGATCGGCGA CATCGTCGGC
GACGACGACG ATGCCGTGGC GCGCGCCACC TCGGAAGTCA TCCGCCTGGC CAACGGCAAG
AGCGGCGAAG GCTTCGTCGC CGTGAGCCCC GAGGCGCGCA AGAAGTTCTG GCTGGACCGC
TCGCGCACCG CCGCCATCGC CAAGCACACC AACGCCTTCA AGATCAACGA AGACGTGGTG
ATCCCGCTGC CGCGCATGGG CGAGTACACC GACGGCATCG AGCGCATCAA CATCGAGCTG
TCGGTCAAGA ACAAACTGAA GCTGGCAGAC GCGCTGCTGG CGTTCTTCGC GCGCACCGAC
CTGCCGCTCG GCCGCACTGA CGACGCCAAC GAGATTCCCA GCGCCGAACT GCTGGAAGAC
CGCGTGCAGC AGGCGCAGCA GCTGCTGCGC GCCACCCGCG CGCGCTGGCA GTACCTGCTG
GACCATCTCG ACACGCCGGT CAATGCCGCG CGCGCCAGCC TGATCGGCCT GGGCCTGGGC
TACCTCGCCC AGACCATCGA CGAGCGCCTG CAGGTCCAGC CGGACGCCAA CCTGTTCCAT
CTGCTGCAGG ACCGCACCAT CCGCGTGTCG TGGAAGACCG AGATCCGCGC CGAGCTGCGC
AAGATCTTCA ACGGCGGCGA GTTCAAGCCG ATCCTCGACG AAGCGCAGGC GATCCACAAG
CAGGTGCTGC GCGGCCGCGT CTTCGTGGCG CTGCACATGC ACGCGGGCGA CGGCAACGTG
CACACCAACC TGCCGGTCAA CTCGGACGAC TACGACATGC TGCAGGACGC CCACAAGGCG
GTGGCCCGCA TCATGACGCT GGCGCGCTCG CTCGATGGCG TCATCTCGGG CGAGCACGGC
ATCGGCATTA CCAAGCTGGA GTTCCTGACC GACGACGAGA TCGCCGACTT CGCCGCCTAC
AAGCGCCGCG TCGACCCGAA CGGCCGCTTC AACAAGGGCA AGCTGCTGCG CGACCTGAAC
GACCCGCAGG CGCCGGCCGC CGATCTGCGC AATGCCTACA CGCCGTCGTT CGGCCTGATG
GGGCACGAGT CGATCATCAT GCAGCAGAGC GACATCGGCG CCATCTCGGA CAGCATCAAG
GACTGCCTGC GCTGCGGCAA GTGCAAGCCG GTGTGCGCCA CCCACGTGCC GCGCGCCAAC
CTGCTGTACA GCCCGCGCAA CAAGATCCTG GCCACCTCGC TGCTGATCGA GGCCTTCCTG
TACGAAGAGC AGACGCGCCG CGGCGTGTCG GTCAAGCACT GGGAAGAGTT CGCCGACGTG
GGCGACCACT GCACGGTCTG CCACAAGTGC GCCACGCCGT GCCCGGTCAA GATCGACTTC
GGCGACGTGT CGATGAACAT GCGCAACCTG CTGCGCAAGA TGGGGCAGAA GAAGTTCAAC
CCCGGCACCG CCGCGTCGAT GTTCTTCCTG AACGCGACCA ACCCCGAGAC CATCAACCTC
ACGCGCAAGG TGATGATCGA CTGGGGCTAC AAGGCGCAGC GCCTGGGGCA CGACATCCTG
AAGAAATTCG CCAGGAAGCA GACCGCGCAT CCGCCCGCCA CGGTGGGCAA GCCGCCGGTG
CGCGAGCAGG TGATCCACTT CATCAACAAG AAGATGCCGG GCAACCTGCC CAAGAAGACG
GCGCGCGCCC TGCTGGACAT CGAGGACAAC GAGATCGTCC CGATCATCCG CGACCCGAAG
GTCACCACGC CCGACAGCGA GGCGGTGTTC TACTTCCCGG GCTGCGGCTC GGAGCGGCTG
TTCTCGCAGG TGGGCCTGGC CACGCAGGCG ATGCTGTGGC ACGCCGGAGT GCAGACCGTG
CTGCCGCCGG GCTACCTGTG CTGCGGCTAT CCGCAGCGCG GCAATGGCCA GTACGACAAG
GCCGAGAAGA TCGTCACCGA CAACCGCGTG CTGTTCCACC GCGTGGCCAA CACGCTCAAC
TACCTCGACA TCAAGACGGT GGTGGTGAGC TGCGGCACGT GCTACGACCA GCTGGCCGGC
TACGAATTCG ACAAGATCTT CCCGGGCTGC CGCATCATCG ACATCCACGA ATTCCTGCTG
GAGAAGGGCG TCAAGATCGA CGGCGTGCAG GGCGTGCGCT ACATGTACCA CGACCCCTGC
CACACCCCGA TCAAGACCAT GGACCCGACC AAGCTGGTCA ACCAGCTGAT GGGCGGCAAC
AAGGGCGCTG ACGGCCAGAC CCGCGCGATC GAGAAGAACG ACCGCTGCTG CGGCGAGTCC
GGCACGCTGG CGGTCTCGCG TCCGGACATC TCCACGCAGA TCCGCTTCCG CAAGGAAGAA
GAGATGCGCA AGGGCGCCGA CAAGCTGCGC CAGCTTGACC AGGCCAGCGG CCAGGGCGGC
GAGGCCTTCA GCGGCGACGT GAAGATCCTC ACCAGCTGCC CGTCGTGCCT GCAGGGCCTG
TCGCGCTACA GCGAGGATGC TTCGGTGCAG GCCGACTACA TCGTGGTCGA GATGGCGCGC
CATGTGCTGG GCGAGACCTG GCTGCAGGAC TACGTCGCCC ATGCCAACGC CGGTGGTATC
GAGCGGGTGC TGGTGTGA
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| Protein sequence | MNAPLLIDAK LAAQDAAPRL REIPYNYTSF SDREIVIRLL GESAWQILDE LRSERRTGRS
ARMLYEVLGD IWVVRRNPYL QDDLLDNPKR RQMLIDALNH RLAEIEKRRT ADQTAHNDPE
SDERSRKVEQ LVVHARRAVK AFEDEFAQVY DLRRRAQKVL GRVTAKDNIK FDGLSRVSHV
TDATDWRVEY PFVVLAPDTE DEVAGIVKGC FELGLTIIPR GGGTGYTGGA VPLTPFSAVI
NTEKLERLDA VEMTDLPGVD HPVATIYSAA GVVTRRVAEA AERAGLVFAV DPTSIDASCI
GGNVAMNAGG KKAVLWGTAL DNLAWWRMVD PDGNWLEVTR LDHNLGKIHD APVATFELKW
FDGNAPVGSK PLRTESLTIE GRKFRKEGLG KDVTDKFLAG LPGVQKEGCD GIITSARWVL
HRMPKSIRTV CLEFFGQARD AIPSIVEIKD YLDAETKKPG GAILAGLEHL DERYLRAVGY
ATKSKRNAFP KMVLIGDIVG DDDDAVARAT SEVIRLANGK SGEGFVAVSP EARKKFWLDR
SRTAAIAKHT NAFKINEDVV IPLPRMGEYT DGIERINIEL SVKNKLKLAD ALLAFFARTD
LPLGRTDDAN EIPSAELLED RVQQAQQLLR ATRARWQYLL DHLDTPVNAA RASLIGLGLG
YLAQTIDERL QVQPDANLFH LLQDRTIRVS WKTEIRAELR KIFNGGEFKP ILDEAQAIHK
QVLRGRVFVA LHMHAGDGNV HTNLPVNSDD YDMLQDAHKA VARIMTLARS LDGVISGEHG
IGITKLEFLT DDEIADFAAY KRRVDPNGRF NKGKLLRDLN DPQAPAADLR NAYTPSFGLM
GHESIIMQQS DIGAISDSIK DCLRCGKCKP VCATHVPRAN LLYSPRNKIL ATSLLIEAFL
YEEQTRRGVS VKHWEEFADV GDHCTVCHKC ATPCPVKIDF GDVSMNMRNL LRKMGQKKFN
PGTAASMFFL NATNPETINL TRKVMIDWGY KAQRLGHDIL KKFARKQTAH PPATVGKPPV
REQVIHFINK KMPGNLPKKT ARALLDIEDN EIVPIIRDPK VTTPDSEAVF YFPGCGSERL
FSQVGLATQA MLWHAGVQTV LPPGYLCCGY PQRGNGQYDK AEKIVTDNRV LFHRVANTLN
YLDIKTVVVS CGTCYDQLAG YEFDKIFPGC RIIDIHEFLL EKGVKIDGVQ GVRYMYHDPC
HTPIKTMDPT KLVNQLMGGN KGADGQTRAI EKNDRCCGES GTLAVSRPDI STQIRFRKEE
EMRKGADKLR QLDQASGQGG EAFSGDVKIL TSCPSCLQGL SRYSEDASVQ ADYIVVEMAR
HVLGETWLQD YVAHANAGGI ERVLV
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