Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0412 |
Symbol | |
ID | 1219216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 439256 |
End bp | 439843 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236770 |
Product | hypothetical protein |
Protein accession | NP_518533 |
Protein GI | 17545131 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.006802 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCAGCC CGGCCGATTC CCCCGTCCAC AGCAACATCG AGGCACGCTT CCCGCAGGCA ATGGAGCGCG CCGCCCGCGT GCGCCTGATG ATCTTCGACG TGGACGGCGT GCTGACCGAC GGCCGCCTGC TGGTCGGCCC GCAGGGCGAG ATCAGCAAGG CCTTCGATAC GCTGGACGGC CACGGCATCA AGCTGCTGGC CCAGGCGGGC ATTACGCCGG CCATCATCAC CGGGCGCGAA TCCGAGATCG TGGCCTGGCG CGCCGGGGAA CTCGGCATCG AACATCTGTA CCAAGGTGTG GCCGACAAGC GCGAGGCCTT CGTCCACCTG CTTGCCGCCA CAGCGCTGCA GCCCGCCGAC GCCGGCTACA TGGGCGACGA CTGGCCCGAC CTGCCGGTCA TGGCGCAGGT CGGCTTTGCC GCCTGCCCCG CCCAGGCCCA CGCCGAGGTG CGCAGCCGCT GCCACTATGT GACCCGGGCC AAGGGCGGTC GCGGCGCGGC GCGTGAAGTC GCCGACCTGA TCCTCAAGGC CCAGGGCGCC TACGACGACC TGCTCGCGCA ACTGCTGCAA GCGCCCAACG CCCCCTGA
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Protein sequence | MSSPADSPVH SNIEARFPQA MERAARVRLM IFDVDGVLTD GRLLVGPQGE ISKAFDTLDG HGIKLLAQAG ITPAIITGRE SEIVAWRAGE LGIEHLYQGV ADKREAFVHL LAATALQPAD AGYMGDDWPD LPVMAQVGFA ACPAQAHAEV RSRCHYVTRA KGGRGAAREV ADLILKAQGA YDDLLAQLLQ APNAP
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