| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0396 |
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| Symbol | ipk |
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| ID | 1219200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 423179 |
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| End bp | 424048 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637236754 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | NP_518517 |
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| Protein GI | 17545115 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000394449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCG CGCCCACCGA ACTGCGCGAC TGTCCCGCGC CCGCCAAGCT CAACCTGTTC
CTGCACGTGG TCGGCCGCCG GCCGGACGGC TATCACCTGC TGCAGACCGT GTTCCAGCTG
ATCGACTGGT GCGACACCCT GCACTTCGGC CGCCGCGCCG ACGGCCGCTT GGTGCGCACC
ACCGACATCC CCGGCGTTCC GGCGGACGAA GACCTGGTCA TCCGCGCCGC CCGCCTGCTG
CAGGCGGAGA CCGGCTGCGC CTACGGCGCC GACATCGCGC TGGAAAAGCG CCTGCCGATG
GGCGGCGGCA TCGGCGGCGG CTCGTCCGAT GCGGCGACGG CGCTGCTGGC GCTCAACCGC
CTGTGGGGGC TCGACCTGCC GCGCGCGAAG CTGATGTCGC TGGGCCTGCG CCTGGGCGCT
GACGTGCCTT TCTTCCTGTT CGGCCAGAAC GCATTTGCCG AGGGCATCGG TGAAGCGCTG
ACACCGATCG CGCTGCCGCC GGCGACCTTT GTGGTCATCC ATCCGCGCGT CCATGTCCCC
ACCCCCGAAA TTTTTTCCGA TGAGGGGTTG ACACGTAACA CTCCCCTCAC CATAATTACG
GACTTTCCTG ACCAACAAAT TGTTTTCGCT TACGGTCGCA ACGATCTGCA AGCGGTGGCG
GAAAGGAAAT ACGGCGAAAT CGCCCGAGCT CTTGCCTGGC TGCGTCAGTT CAGCCCACTG
GCAAGGATGA CCGGATCCGG CGCCTGCGTG TTCGCACCGT TTGATCGTGC AGAACAGGCA
CAAGCGGTGG CGGATCAGGT GCCTTCCGAA TGGGAAGGTC GGTGTGCGGC AGGTCTGACG
CATCACCCGC TCGCGATGTT CGCTGTATAA
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| Protein sequence | MPSAPTELRD CPAPAKLNLF LHVVGRRPDG YHLLQTVFQL IDWCDTLHFG RRADGRLVRT
TDIPGVPADE DLVIRAARLL QAETGCAYGA DIALEKRLPM GGGIGGGSSD AATALLALNR
LWGLDLPRAK LMSLGLRLGA DVPFFLFGQN AFAEGIGEAL TPIALPPATF VVIHPRVHVP
TPEIFSDEGL TRNTPLTIIT DFPDQQIVFA YGRNDLQAVA ERKYGEIARA LAWLRQFSPL
ARMTGSGACV FAPFDRAEQA QAVADQVPSE WEGRCAAGLT HHPLAMFAV
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