Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0333 |
Symbol | |
ID | 1219136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 365954 |
End bp | 366595 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236690 |
Product | putative transmembrane protein |
Protein accession | NP_518454 |
Protein GI | 17545052 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.847937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAA CGCCGCAGCC GATCGGCGGC ATCGGCTCGA CCGGCCTACA ATGGTGCCTT TCCCACCTTG ATTCGCGGAG CGTTGCCGAC ATGGCCTCGT CCCTGACCTC CTCTCCGGAC ACCCCGCCCG CCGTCGGCGC GCGCCGCTGG CTGCTGCCGG TGATCGTGCT GGTGCTGGCC GCCGCCGGCT GGTTCGGCTG GCGCGCGTTC TCGCCGTCGC AGCAGGTGCC GGCCGCCAGC TTTACGCTGC TCGACGGGCA GAAGCTGTCC ACGCGAGACC TCAAGGGCAA GGTTTACCTG GTGAACTTCT GGGCGACCAG CTGCGCCACG TGCGTCAAGG AAATGCCCAA CATGATCCAG ACCTACAACA AGTTCAAGGG CCAGGGCCTG GAGTTCGTCG CGGTGGCAAT GCGCTATGAC CCGCCGATGT ACGTGATGAA CTACAGCCAG ACGCGCCAGC TGCCCTTCAA GGTGGCGATG GACGCCGATG GTGCCGCGGC CCGTGCCTTC GGCGACGTGC AGCTCACGCC CACCACCTTC CTGGTCGACC GCGATGGCCG CATCCTCAAG CGCTACGTGG GCGAGCCGGA GTGGGCCGCG TTCGAGACGC TGCTGCGGGA CACGCTCGCC AAGCAGGCCT GA
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Protein sequence | MDETPQPIGG IGSTGLQWCL SHLDSRSVAD MASSLTSSPD TPPAVGARRW LLPVIVLVLA AAGWFGWRAF SPSQQVPAAS FTLLDGQKLS TRDLKGKVYL VNFWATSCAT CVKEMPNMIQ TYNKFKGQGL EFVAVAMRYD PPMYVMNYSQ TRQLPFKVAM DADGAAARAF GDVQLTPTTF LVDRDGRILK RYVGEPEWAA FETLLRDTLA KQA
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