| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0328 |
|---|
| Symbol | |
|---|
| ID | 1219131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 359734 |
|---|
| End bp | 360381 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637236685 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518449 |
|---|
| Protein GI | 17545047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGC ATACCGCAGA ACGCCTGATT CCCGGCCCGG TCGGGAACAT CGACGTCTCC
GTCGACCTGC CGGACGCCGC GCCGCGCGGC CTGGCCCTGG TCGGCCATCC GCATCCGCTG
TTCGGCGGCA CCAAGGACAA CAAGGTCGCG CAGACCCTGG CCCGCACCTT CGTCGGCCTG
GGCTATGCGA CGGTGCGGCC GAACTTCCGC GGCGTGGGCA AGACCGAGGG CACGCACGAC
AACGGCATCG GCGAGCAGGA CGACATGCTG GCCGTGCTCG ACTGGATGCG CACGCAGGCC
GAATGGTCGC CCGAGGTCGC CACGCTGCCG CTGGCGCTCG GCGGCTTCTC GTTCGGCAGC
TTCGTCGTCT CGCAGGTGGC GCGCCGCCTG GCCGAGGCGG GCACGCCCGC GGAACGCCTG
GCGCTGGTCG GCACCGCCAC CTCGCGCTGG GATGTGGCGC CGGTGCCCGC GGACACCATC
GTCATCCACG GCGAGCTGGA CGACACGGTG CCGCTTGCCG CCGTGCTCGA CTGGGCGCGA
CCGCAGGAAC TGCCGGTGAT TGTCATCCCC GGCGCGGATC ATTTCTTTCA CCGCAAGCTT
CACCTGATCC GGCAGCAGAT CGCGGGCGCC TGGACGCCGC GCTCGTAG
|
|---|
| Protein sequence | MNVHTAERLI PGPVGNIDVS VDLPDAAPRG LALVGHPHPL FGGTKDNKVA QTLARTFVGL
GYATVRPNFR GVGKTEGTHD NGIGEQDDML AVLDWMRTQA EWSPEVATLP LALGGFSFGS
FVVSQVARRL AEAGTPAERL ALVGTATSRW DVAPVPADTI VIHGELDDTV PLAAVLDWAR
PQELPVIVIP GADHFFHRKL HLIRQQIAGA WTPRS
|
|---|
| |