Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0309 |
Symbol | aut |
ID | 1219112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 340940 |
End bp | 341440 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236666 |
Product | putative transferase protein |
Protein accession | NP_518430 |
Protein GI | 17545028 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTC TCCGCCAGCC CGCGCCCATG TTCGAACAGA AGCTCTGCGA CTCCGCCGAC GTGGAGGCCC GCGTGCGCGC CTTGCCGCGC CCGCTGGTCT TCACCAACGG CGTGTTCGAC ATCCTGCATC GCGGGCACGT GACCTATCTT GCGCAGGCGC GCGCGCTGGG GGCCTCGCTG GTGGTGGGCG TGAACACCGA CGCCTCGGTG CGCATGCTGG GCAAGGGCGA CGATCGTCCG CTCAATGCCG AGGTGGATCG CCTCGCGGTA CTGGCCGCGC TGGAGTCGGT GAGCCTGGTG GTGCTGTTCG CCGAACGCAC GCCGGTCGAG CTGATCCGGC GCGTGCGCCC CGACATCTAC GTCAAGGGCG GCGACTACGA CATCGACACG CTGGAAGAAA CCCGCGTCGT GCGCGGCTGG GGCGGGACGG CCTTGGCGAT TCCGTTCGAC CACGACCGCT CGACGACGCA GCTGCTCAAG CGCGTGCGCG CGACGTCCTG A
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Protein sequence | MSTLRQPAPM FEQKLCDSAD VEARVRALPR PLVFTNGVFD ILHRGHVTYL AQARALGASL VVGVNTDASV RMLGKGDDRP LNAEVDRLAV LAALESVSLV VLFAERTPVE LIRRVRPDIY VKGGDYDIDT LEETRVVRGW GGTALAIPFD HDRSTTQLLK RVRATS
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