Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0298 |
Symbol | pcaD2 |
ID | 1219101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 330813 |
End bp | 331652 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236655 |
Product | B-ketoadipate enol-lactone hydrolase protein |
Protein accession | NP_518419 |
Protein GI | 17545017 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG ACGCCATCAC CGAATCGGGC CACGCCGATG CCAACGGCAT CCGCATCCGC TACCGCATCG ACGGCGCGGA CGGGCCGTGG ATCATGCTCG CGCACGCGCT CGGCGTGGAC CACCAGATGT GGGACAGCAT CGCGCACCGC CTCGCGTCGC GCCACCGGGT CCTGCGCTAC GACGCGCGCG GCCATGGCGG CACGACGGCG CCGCACGGCA CGTACACGCT GTTCCAGATG GCCGACGACG CGGCCGGCCT GCTCGATGCG CTGTCGATCC CGCAGGTCCA TTTCGTCGGG CTGTCGATGG GCGGCATGGT GGCGCAGATC CTGGGCGTGC GGCACCCGCA GCGGCTGCTG TCGCTGACCC TGTGCGACAC GGTCTGCCAT ACGCCCGTTG CCGCGCACGC CATGTGGGAT GACCGCATCG GCCAGGTCGA GGCGCACGGC ATGGCCGGCA TCGTCGAGCC GACCCTGCAG CGCTGGCTGA CCACGCCGTT CCGCGAAGCG CATCCCGAGG TGGCCGCGCG CATCCGCGCG CTGCTGCTGG CCACCCCGCC GCACGGCTAT GTCGGCGCCT GCCTTGCCAT CAAAGCGCTC GACACGCGCG ATGCGCTGCC GCGCATTGCC TGCCCGGCCC TCGTGGTGGT CGGCGAAGAC GATGCGGGCG CGCCGCCCGA CGTCGCGCGC GCGATCGCCG GCAGCCTGCC GAACGCGCGT CTGAAAGTGA TGCCGCATGC GGCCCACCTG GCCCCCATCG AACAGGAGGA GGCCTTCCTC ACCGATCTGG ACGAGTTCCT CGGGCACGCG GGATGCGGCA GTCAGTGCGA GACGCCCTGA
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Protein sequence | MTADAITESG HADANGIRIR YRIDGADGPW IMLAHALGVD HQMWDSIAHR LASRHRVLRY DARGHGGTTA PHGTYTLFQM ADDAAGLLDA LSIPQVHFVG LSMGGMVAQI LGVRHPQRLL SLTLCDTVCH TPVAAHAMWD DRIGQVEAHG MAGIVEPTLQ RWLTTPFREA HPEVAARIRA LLLATPPHGY VGACLAIKAL DTRDALPRIA CPALVVVGED DAGAPPDVAR AIAGSLPNAR LKVMPHAAHL APIEQEEAFL TDLDEFLGHA GCGSQCETP
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