Gene RSc0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0217 
Symbol 
ID1219020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp239883 
End bp240911 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID637236574 
Productoxidoreductase transmembrane protein 
Protein accessionNP_518338 
Protein GI17544936 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT CGATATTCGA CCAGCTGTGG GGTGCACGCA TGAAGAAACG CCAACTCGGC 
AGGAGCGGCC TGCAAGTCTC CGCTCTGGGC TTCGGCTGCA TGGGCATGAG CTTCGGCTAC
GGTCCGACCG CGCTGAGCCG CAATGAGCAG ATCGCCGTGA TTCGCGCGGC TTACGAGCGC
GGCGTCACGC TGTTCGATAC GGCCGAAGCC TACGGCCCCT GTGTCAATGA AGAACTGGTG
GGCGAGGCGG TGGCGCCATT CCGCAGCCGG ATCGTGCTCG CCACGAAGTT CGGCTTCGAC
ATCCGGGACG ACCGGATCGT CGGGCTGAAC AGCCGACCCG AGCACATCAG GGCCGTCGCC
GAGGCGTCGC TCAAGCGCCT GAGGACGGAC GTCATCGACC TGTTCTACCA GCACCGCGTG
GATCCCAATG TGCCCATCGA AGAGGTTGCC GGGGCGCTGA AGGATCTGGT GGCCGAAGGC
AAGGTCAGGC ATTTCGGCTT GTCGGAGGCG GGGCCGCGCA CCATCCGCCG CGCCCACGCG
GTGCATCCGG TGAGCGTGCT GCAGACGGAG TATTCGCTGT GGACGCGCGA TCCCGAGGGC
GGCGTGCTGC AGACCTGCGA GGAGTTGGGC ATCGGCTTCG TGCCCTGGAG CCCGCTCGGC
CAGGGCTATC TGACCGGCAA GGTGCGCGCG GACACGGCCT TCGACGCGAC CGACCTGCGC
AGCACGTTTC CCCGGTTCAC GCCCGAGGCC ATGCAGGCCA ACCAGGCGTT GCTCGCCGGG
ATCCGGACGA TCGCTGACCG CAAAGGCGCC ACGCTCGCGC AGATCGCACT GGCCTGGCTG
CTCGCGCAGA AGCCGTGGAT CGTGCCGATT CCCGGCACGC GCAGCGCGGC CCGCCTGGCG
GAAAACCTCG GGGCGGCCGA CGTGTGCCTG GATGCGGCCG ACCTGAGCGA GATCGACGCC
GCGCTGGCCA ACGCGCCGGT TGGGCAACCT CGCCTGTCCG ACGCGCATCT GCGTTTCATC
GACCCATGA
 
Protein sequence
MIGSIFDQLW GARMKKRQLG RSGLQVSALG FGCMGMSFGY GPTALSRNEQ IAVIRAAYER 
GVTLFDTAEA YGPCVNEELV GEAVAPFRSR IVLATKFGFD IRDDRIVGLN SRPEHIRAVA
EASLKRLRTD VIDLFYQHRV DPNVPIEEVA GALKDLVAEG KVRHFGLSEA GPRTIRRAHA
VHPVSVLQTE YSLWTRDPEG GVLQTCEELG IGFVPWSPLG QGYLTGKVRA DTAFDATDLR
STFPRFTPEA MQANQALLAG IRTIADRKGA TLAQIALAWL LAQKPWIVPI PGTRSAARLA
ENLGAADVCL DAADLSEIDA ALANAPVGQP RLSDAHLRFI DP