Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0183 |
Symbol | |
ID | 1218986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 206630 |
End bp | 207127 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637236540 |
Product | hypothetical protein |
Protein accession | NP_518304 |
Protein GI | 17544902 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0517579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTCA GCGAGATTTG CTCCCGCCGC ATCGTCCACA TTCCGGCATC TGCAGCACTG CAGATGGCTG CTCGCCTGAT GCGGGACCAA TGTCTGCGCG CGTTGTTCGT GACAGAGCAC GGCGTGACTG GAATGCGGGT CGTCGGCATT GTCACGGACC GCGACATGGT GGTGCACGGT CTCGCCAACC GTGCCGACTG CGCTCAAACC ACCATATCCG AGGTGATGAC CCGCGGCGTG CTGACCATTC AGGGTCATGC CGTCATTAGC GAAGCGCTGC GCACCATGCT TGGTCACGGT TTGCACCGCC TGGCGGTGAT CGACGATCAG CAGCAACTCA TCGGCATGCT GACCTTGGAT GACACCATTC GTGCAATGGG CAGCGAATGG ACTTTGCTGG CCGGCATTCT CGGCCGCGAC CGATGCGCAG ATCAGGGCTC CGAAACGTCA CCACACTTGG TGGTTTCGGA TGCTCGCCCC ATGTCATTTC ATCAGTAG
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Protein sequence | MRVSEICSRR IVHIPASAAL QMAARLMRDQ CLRALFVTEH GVTGMRVVGI VTDRDMVVHG LANRADCAQT TISEVMTRGV LTIQGHAVIS EALRTMLGHG LHRLAVIDDQ QQLIGMLTLD DTIRAMGSEW TLLAGILGRD RCADQGSETS PHLVVSDARP MSFHQ
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