Gene RSc0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0179 
Symbol 
ID1218982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp203511 
End bp203966 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content60% 
IMG OID637236536 
Producthypothetical protein 
Protein accessionNP_518300 
Protein GI17544898 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.096278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAC GCATCCTGCT CGCCATCGAC GGCAGCCACG CGTCCTATCT CGCCCTGCAC 
CAGGCGATTG TGGTCAGCAA AGCGACGGGC GCCGAAATCG AAGCCCTCTT TGTTGCCGAT
AGCAGCGACG TGACCTTCGA CATGGTCGGG GCTGACTCCG TTGCCTACGC CAAACAGGTT
GTCGAGTTCG GCCGAGACAC GCTGGCCGAG GTTGCGACCA AATTGGAGGC CGCTGGCGTC
AAGCATTCGA CCAAGTTGCT AGAGAAATCC ATTGTGCCGG GGCAGATTTC CGCAACGATT
GTGGCCGAGG CCAACGAGAC CGGCACTGAC CTGATTGTGC TTGGTACTCA CGGCCGGCGC
GGGCTCAAAC ACCTGGTGCT TGGCAGTGTG GCCGAAGGCG TAGTGCGCAA GACGAACAAA
CCTGTGCTGA TGGTTCGCAG CGAGGTTGAG GAGTGA
 
Protein sequence
MYQRILLAID GSHASYLALH QAIVVSKATG AEIEALFVAD SSDVTFDMVG ADSVAYAKQV 
VEFGRDTLAE VATKLEAAGV KHSTKLLEKS IVPGQISATI VAEANETGTD LIVLGTHGRR
GLKHLVLGSV AEGVVRKTNK PVLMVRSEVE E