Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0175 |
Symbol | |
ID | 1218978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 197176 |
End bp | 198114 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236532 |
Product | C32 tRNA thiolase |
Protein accession | NP_518296 |
Protein GI | 17544894 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.186206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCT CCAACAATTT CCACCGCCTC GAAACCCGCC TGCAGTCGCA GGCCGGCCGC GCCATCGGCG ACTTCAAGAT GATCGAGGAC GGCGACACCG TGCTGGTCTG CCTGTCCGGC GGCAAGGATT CGTACACCAT GCTGTCGGTG CTGATGGCCC TGCAGAAGCG CGCGCCGATC GACTTCAAGC TGATCGCGAT GAACCTCGAT CAGAAGCAGC CGGGGTTTCC GGAGGACGTG CTGCCCGGGT ATCTGAAGAA GGTGGGCGTG GAGTACGTGA TCGTCGAGGC CGACACGTAT TCGATCGTCA AGGAGAAGGT GCCCGAGGGC AAGACCACGT GCTCGCTGTG CTCGCGCCTG CGCCGCGGCG TGATCTATCG CACGGCCAAG GAGCTGGGCG CCAACAAGAT CGCGTTGGGC CACCACCGCG ACGACATCGT CAACACGTTC TTCCTGAACA TGTTCTTCGG CGGCAAGATG AAGGCGATGC CGCCCAAGCT CGCCACCGAC AACGGCGACC ACATCGTGAT CCGTCCGCTG GCCTACTGCG CGGAGAAGGA GATCGCCGCC TACGCCCGCG CGATGGAGTT CCCCATCATC CCGTGCAACC TGTGCGGCTC GCAGGAGAAC CTGCAGCGCA AGAAGGTCAA GGAGATGCTG CTCGAGTGGG AGCGCCAGGC GCCGGGCCGC ATCGACAACA TCTTCTCGGC GCTGCAGAAC GTGGTGCCGT CGCACCTGGC CGATACCGAC CTGTTCGACT TCAACGGCCT GACCACCGGC CTGGCCAAGA TCGGCGAGGA GGCGCTGTTC GGCCAGACCG CGTACGACCA GGCGCCGCTG GTGTTCGCCG GCTCGCACGA CGATCGCATC GAGTTCGTGC GCTTCGAGCG CAATCCGGCG GGCAAGGCGC CGGAGGGCGC CGAGCAGCCC GCGGCCTGA
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Protein sequence | MTFSNNFHRL ETRLQSQAGR AIGDFKMIED GDTVLVCLSG GKDSYTMLSV LMALQKRAPI DFKLIAMNLD QKQPGFPEDV LPGYLKKVGV EYVIVEADTY SIVKEKVPEG KTTCSLCSRL RRGVIYRTAK ELGANKIALG HHRDDIVNTF FLNMFFGGKM KAMPPKLATD NGDHIVIRPL AYCAEKEIAA YARAMEFPII PCNLCGSQEN LQRKKVKEML LEWERQAPGR IDNIFSALQN VVPSHLADTD LFDFNGLTTG LAKIGEEALF GQTAYDQAPL VFAGSHDDRI EFVRFERNPA GKAPEGAEQP AA
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