Gene RSc0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0093 
SymbolahcY 
ID1218896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp106034 
End bp107458 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID637236450 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionNP_518214 
Protein GI17544812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TGACCGATCT GAAACACGAC TACCTCGTCG CCGACATCAA GCTGGCCGAC 
TGGGGCCGCA AGGAAATCGC CATCGCCGAG ACCGAAATGC CGGGCCTGAT GGCGATCCGC
GACGAATTTG CCGCCAGCCA GCCGCTCAAG GGCGCGCGCA TCGCCGGCTC GCTGCACATG
ACCATCCAGA CCGCCGTGCT GATCGAGACG CTCAAGGCGC TCGGCGCCGA CGTGCGCTGG
GCCTCGTGCA ACATCTTCTC GACGCAGGAC CACGCCGCCG CCGCCATCGC TGCATCGGGT
ACGCCGGTGT TCGCGTTCAA GGGCGAGTCG CTCAAGGAAT ACTGGGACTT CACGCACCGC
ATCTTCGAAT GGGCCGACGG CGGCACGCCC AACATGATCC TGGACGACGG CGGCGACGCC
ACGCTGCTGC TGCACCTGGG CGCCAAGGCT GAGCAGGACG CCTCGGTGAT CGCCAAGCCG
GGCAGCGAGG AAGAAACCTT CCTGTTCGCC GCGATCAAGG AAAAGCTGGC CAAGGACGCG
ACGTTCTACA GCCGCAACCT CGACGCCATC AAGGGCGTGA CCGAAGAGAC CACCACCGGC
GTGCACCGCC TGTACCAGAT GGCCCAGCGC GGCGAGCTGC GCTTCCCGGC CATCAACGTC
AACGACTCGG TCACCAAGAG CAAGTTCGAC AACCTGTACG GCTGCCGTGA ATCGCTGGTC
GACGGCATCA AGCGCGCGAC CGACGTGATG ATCGCCGGCA AGGTGGCCGT CGTGGCCGGC
TACGGCGATG TGGGCAAGGG CTCGGCGCAG GCGCTGCGCG CGCTGTCGGC GCAGGTGTGG
GTGACCGAAA TCGACCCGAT CTGCGCGCTG CAGGCCGCCA TGGAAGGCTA CCGCGTGGTG
ACCATGGACT ACGCCGCCGA GCACGGCGAC ATCTTCGTCA CCTGCACCGG CAACTACCAC
GTCATCACGC ACGACCACAT GGCCAAGATG AAAGACCAGG CCATCGTCTG CAACATCGGC
CACTTCGACA ACGAGATCGA CATCGCCTCG GTCGAGCAGT ACCAGTGGGA AGAAATCAAG
CCGCAGGTCG ATCACGTGAT CTTCCCCGAC GGCAAGAAGA TCATCATCCT GGCCAAGGGC
CGCCTGGTGA ACCTGGGCTG CGCCACCGGC CATCCGTCGT ACGTGATGAG CAGTTCGTTC
GCCAACCAGA CCATCGCCCA GATCGAGCTG TGGACCGAGG CGCAGAAGGG CTCGAGCAAG
TACCCGGTGG GCGTCTACAC GCTGCCCAAG CATCTCGACG AGAAGGTCGC GCGCCTGCAG
CTCAAGAAGC TGAACGCGCA GCTGACCGTG CTGACCGACA AACAGGCCGC CTACATCGGC
GTGAGCAAGG AAGGCCCGTA CAAGGCCGAC CACTATCGCT ATTAA
 
Protein sequence
MNAVTDLKHD YLVADIKLAD WGRKEIAIAE TEMPGLMAIR DEFAASQPLK GARIAGSLHM 
TIQTAVLIET LKALGADVRW ASCNIFSTQD HAAAAIAASG TPVFAFKGES LKEYWDFTHR
IFEWADGGTP NMILDDGGDA TLLLHLGAKA EQDASVIAKP GSEEETFLFA AIKEKLAKDA
TFYSRNLDAI KGVTEETTTG VHRLYQMAQR GELRFPAINV NDSVTKSKFD NLYGCRESLV
DGIKRATDVM IAGKVAVVAG YGDVGKGSAQ ALRALSAQVW VTEIDPICAL QAAMEGYRVV
TMDYAAEHGD IFVTCTGNYH VITHDHMAKM KDQAIVCNIG HFDNEIDIAS VEQYQWEEIK
PQVDHVIFPD GKKIIILAKG RLVNLGCATG HPSYVMSSSF ANQTIAQIEL WTEAQKGSSK
YPVGVYTLPK HLDEKVARLQ LKKLNAQLTV LTDKQAAYIG VSKEGPYKAD HYRY