Gene RSc0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0075 
SymbolrrmB 
ID1218877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp85330 
End bp86655 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content71% 
IMG OID637236431 
Productputative RNA methyltransferase (SUN protein) 
Protein accessionNP_518196 
Protein GI17544794 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.191133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC CGCCCGATTC CCTCGCCCAT GCCCTGTCGC TCGCCGCTGC CGTCATCGGC 
CGGTTGCGGC AGGGGACGGC GCTGCCGCAG GCCATCGATG CCGCATGCCC GGGCCAGCCC
GGTGCCACGC GTGGCGCGGT GCAGGATCTC GCCTATCGCG CCACACGCTG GCTCGGCAGC
GCCGATTGGC TGATCCGCAC GCTGATTCCG CGCCCGCCCG CCGAGGGTGC GGCCAACCTG
TTGCGCGTGG CGCTGGCTCA GCTGCTCGAC ACGCCGCAGC CCTATGCACC TTTCACGGTC
GTCGATCAGA CCGTGCGTGC TGCCTCGGCC GACCCGAAGC TCGCGCACGC CAAGGGCATG
ATCAACGGGG TGTTGCGGCG TTTCCTGCGG GAGCAGGCGG ACCTGACGGC CGCCATGCAG
GCCGATCCGG TCGCGGCGAT CAACTATCCG GCCTGGTGGA TCGGTGCCGT GCGCGAGGCC
TACCCCGAGG CGTGGCAGGC CATCCTGGCG GCCGGCAACC GTCGTCCGCC GATGGTGTTG
CGCGTCAATC CGAGCCGCGT GCCGGTCGAG GCCTACCTCG CGCGGCTGGC CGAGGTCGGC
ATCGAGGCCG AACGCATCGG CGCGCAGGCC GTGCGCCTGG CGCGCGCGAT GCCGGTGGGC
GATCTGCCCG GCTTCGCCGA GGGCGATGTC TCGGTGCAGG ATGCGGGCGC GCAACTCGCG
GCGGCGCTGC TCGATGTGGC GCCCGGCCAG CGTGTGCTGG ATGCCTGCGC CGCGCCGGGC
GGCAAGACCG GCCATCTGCT GGAGCTCGCC GACGGCCTGG ACGTGGTCGC GCTCGAATCC
GATGCCGCGC GCGCCGCGCG CATCGGCGAG AACCTGGCGC GGCTGGGGCA GACCGCCACC
GTTTGCGTGG GCGACGCGGC CAAGCCCGAT GCATGGTGGG ACGGCCGCCC GTTCGACCGC
ATCCTGGTCG ACGTGCCGTG CTCCGCGGCG GGCATCGTGC GGCGTCATCC GGACATCCGC
TGGCTGCGCC GTCCGGCCGA TCTGCCTGCG CTGGCCGCGC TGCAGCGGGA CATCGTGAGC
GCGCTATGGG CATGCCTGAA GCCCGGTGGC AAGCTGGTTT ATGTCACCTG TTCGATTTTC
CCGACGGAAG GCGAGGCCCA GGCCCGATGG TTTGAAAGCC GTCTGCAAGA TGCGATACGA
TTGCACGCGC CCGGCCAGTT GCTGCCGGCC ATGCCCGAGG CGGCTGGCGG CTTCGTTCCT
GGCGTCTCAT CCCTGCCGCT CGACCACGAC GGCTTCTATT ACGCGGTGTT CCAGAAACGG
CCCTGA
 
Protein sequence
MRLPPDSLAH ALSLAAAVIG RLRQGTALPQ AIDAACPGQP GATRGAVQDL AYRATRWLGS 
ADWLIRTLIP RPPAEGAANL LRVALAQLLD TPQPYAPFTV VDQTVRAASA DPKLAHAKGM
INGVLRRFLR EQADLTAAMQ ADPVAAINYP AWWIGAVREA YPEAWQAILA AGNRRPPMVL
RVNPSRVPVE AYLARLAEVG IEAERIGAQA VRLARAMPVG DLPGFAEGDV SVQDAGAQLA
AALLDVAPGQ RVLDACAAPG GKTGHLLELA DGLDVVALES DAARAARIGE NLARLGQTAT
VCVGDAAKPD AWWDGRPFDR ILVDVPCSAA GIVRRHPDIR WLRRPADLPA LAALQRDIVS
ALWACLKPGG KLVYVTCSIF PTEGEAQARW FESRLQDAIR LHAPGQLLPA MPEAAGGFVP
GVSSLPLDHD GFYYAVFQKR P