| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0074 |
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| Symbol | htpX |
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| ID | 1218876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 84379 |
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| End bp | 85239 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236430 |
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| Product | M48 family peptidase |
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| Protein accession | NP_518195 |
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| Protein GI | 17544793 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.123585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACT GGATCAAGAC CTTCATGCTG ATGGCAGCGA TCACCGCGCT GTTCATCGTC
ATCGGCGGCA TGATCGGCGG ACGCAGCGGG ATGATGCTGG CGCTGCTGTT CGCGCTGGGC
ATGAATTTCT TCTCGTACTG GTTCTCCGAC AAGATGGTCC TGCGCATGTA CAACGCGCAG
GAAGTCAGCG AGACCACCGC GCCGCAGTTC TACCGCATGG TGCAGGAGCT GGCGGGGCGC
GCCGGCCTGC CGATGCCGCG CGTCTACCTG ATCGACGAAG CCCAGCCCAA CGCCTTTGCC
ACCGGCCGCA ACCCGGAGCA TGCGGCGGTC GCGGCCACCA CCGGCATCCT CAACATCCTG
AGCGAGCGCG AGCTGCGCGG CGTGATGGCG CACGAACTGG CACACGTGCA GCACCGCGAC
ATCCTGATCT CCACCCTCTC GGCCACCATG GCCGGCGCGA TCTCGGCGCT GGCCAACTTT
GCGGTGTTCT TCGGCGGGCG CGATGAGGAA GGCCGGCCGG TCAACCCGAT CGCCGGGATT
GCCGTGGCGA TCCTCGCGCC GCTGGCGGCA TCGCTGATCC AGATGGCGAT CTCCCGCGCG
CGCGAGTTCG AAGCCGACCG CGGCGGCGCG GTCATCAGCG GCGATCCGCA GGCGCTGGCG
TCGGCGCTGG ACAAGATCCA TCGCTTTGCC GCCGGCATTC CGTTCGCGGC GGCGGAGGCG
CATCCGGCCA CCGCGCAGAT GATGATCATG AACCCGCTGC ACGGCGGCGG CCTGGCCAAC
CTGTTCAGCA CGCACCCGGC CACCGAGGAG CGCATCGCGC GCCTGATGCA CATGGCGCAG
ACAGGGACCT ATCCGGCCTG A
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| Protein sequence | MFNWIKTFML MAAITALFIV IGGMIGGRSG MMLALLFALG MNFFSYWFSD KMVLRMYNAQ
EVSETTAPQF YRMVQELAGR AGLPMPRVYL IDEAQPNAFA TGRNPEHAAV AATTGILNIL
SERELRGVMA HELAHVQHRD ILISTLSATM AGAISALANF AVFFGGRDEE GRPVNPIAGI
AVAILAPLAA SLIQMAISRA REFEADRGGA VISGDPQALA SALDKIHRFA AGIPFAAAEA
HPATAQMMIM NPLHGGGLAN LFSTHPATEE RIARLMHMAQ TGTYPA
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