Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0068 |
Symbol | smf |
ID | 1218870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 77370 |
End bp | 78575 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236424 |
Product | SMF protein |
Protein accession | NP_518189 |
Protein GI | 17544787 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCGATG CCTCACAGGT CGCGGCGCCC GCCGCGACCG CTCCCGCCGA TCCCCTCGAC GCCACACGCG ATCCCGCCGA GCTGGCCGCT TGGCTGCGGC TGACGGAAAC GCCGGGCATC GGCCCCGTCG CCGCGCGGCA ACTGCTGGCC GCTTTCGGGC TACCCCAGGA CATCTTCCGT CAATCCTATG CGGCACTCGC CAAGGTGCTG CCTGAACGAC AAGCGCGCGC GCTGCTGGCC GAGCCGGACG AAGCGCTCGC CGCGCTGATC GAGCGGACTG CCGCCTGGGC CGCCGAACCG GGCAATGCCA TCTTCACGCT GGCCGACCGT GGCTACCCGC CCCGGCTGCT GGAACTCCCC GATCCGCCGA CGCTGCTGTA TGCCAAGGGC GATGTCTCGC TGCTGCGGGC TGCGGCGGTG GGCGTGGTCG GCGCGCGCAG CGCCACCGCG CAGGGTCTGG AGAACGCCCG CGCCTTCGCG CAGGCGCTGT CCGCCGCCAA CGTGACGATC GTCTCGGGGC TGGCGCTGGG CATCGATGCC GCCGCACACG ACGGCGCGCT GACCGGGCCC GGCAGCACCA TCGCGGTGGT CGGCACGGGG CTGGACATGG TCTACCCGGC CCGGAACCGA GCCCTGGCAC ACCACATCGC CGAAGCCGGG CTGATCCTGT CGGAGTACCC GCTCGGCATG GGGGCACGGG CCGAGAACTT CCCGCGCCGC AACCGGCTGA TCGCCGGGCT CGCGCGCGGA CTGCTGGTGG TGGAGGCCGC CGCGCAATCC GGTTCGCTGA TCACCGCCCG GCTGGCCGCC GAGCAGGGGC GCGATGTGTT CGCCATTCCC GGCTCGATCC ATTCGCCGCT GGCCAAGGGC TGCCACCTGC TGATCAAGCA GGGTGCCAAG CTGGTCGAGA CGGCGGCCGA CATCCTGGAC GAACTGGGCT GGAGCCGCAC ACCGACGCCA GCGACACGGA CACCGCGCAC GGCCGCCCAG GCACCTGTCC CCGCATCCGC CCCGGCCGCA CGTCCGGCGG CAACGGCCGC GGAAACCGCG TTGCTCGATG CGCTCGGCTT CGACCCGGTC GACCTCGACA CCCTGTGCGA ACGCACCGGC CAAACCGCGG CCAACCTGTC GGCACAACTG CTGGCGCTGG AGCTGGCAGG CCACATCGAG CGCCAACCGG GCGGACGCTT TCTGCGGCTG CCATAG
|
Protein sequence | MIDASQVAAP AATAPADPLD ATRDPAELAA WLRLTETPGI GPVAARQLLA AFGLPQDIFR QSYAALAKVL PERQARALLA EPDEALAALI ERTAAWAAEP GNAIFTLADR GYPPRLLELP DPPTLLYAKG DVSLLRAAAV GVVGARSATA QGLENARAFA QALSAANVTI VSGLALGIDA AAHDGALTGP GSTIAVVGTG LDMVYPARNR ALAHHIAEAG LILSEYPLGM GARAENFPRR NRLIAGLARG LLVVEAAAQS GSLITARLAA EQGRDVFAIP GSIHSPLAKG CHLLIKQGAK LVETAADILD ELGWSRTPTP ATRTPRTAAQ APVPASAPAA RPAATAAETA LLDALGFDPV DLDTLCERTG QTAANLSAQL LALELAGHIE RQPGGRFLRL P
|
| |