| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0062 |
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| Symbol | |
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| ID | 1218864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 67285 |
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| End bp | 69690 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236418 |
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| Product | substrate-binding transmembrane protein |
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| Protein accession | NP_518183 |
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| Protein GI | 17544781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.559785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA TCCGCAACGT CGAACAGGAG CTGTCGCGCT TTCGCGTGCG GCTGGCCGCG
GCCGCGCTGT TCGTGCTGGT GTGCTTCGGG CTGCTGCTGG TGCGCTTCTT CTGGCTGCAG
TCGGTCAAGC ACGAGCAGTA CTCGGCCAAG GCCGAGGACA ACCGCATCTC GGTGGCGCCG
ATCGAGCCCA ACCGCGGCAT CATCATGGAC CGCAACGGGG TGGTGCTGGC GCGCAACTAC
TCGGCCTACA CGCTGGAGGT CACCCCGTCC AAGCTGCAGG ACACGCTGGA CAACACCATC
GACCAGCTCG CCCAGGTGAT CGACATCCAG CCGCGCGACC GTCGCCGCTT CAAGCGCCTG
ATGGAAGACG CGCGCAGCTT CGAGAGCCTG CCGATCCGCA GCCAGCTGAC CGACCAGGAG
GTGGCGCGCT TCTCGGCACA GCGCTTCCGC TTCCCGGGCG TGGACGTGCA CGCTAGGCTG
TTCCGCCAGT ACCCGTTGGG CGAGGCGGCG GCGCACGTGA TCGGCTACAT CGGCCGCATC
TCCGAGCGCG ACCTCGAGCG CATCGACGAC ATGAGCGAGG CCAACAGCCA GCCCAACGTC
ACCTACGATC CGCGCAAGGA CGCCAACAAC TACAGCGGCA CCGAGTACAT CGGCAAGGTC
GGCATCGAGC AGAGCTACGA GACCGAGCTG CACGGCCTGA CCGGCTACGA AGAAGTCGAG
GTCAGCGCGG GCGGGCGGCC GATCCGCACG CTGTCCACCT CGCAGGCCAC GCCCGGCAAC
AACCTGATCC TGTCGCTCGA CATCAACCTG CAGCGGCTGG CCGAGCAGCT GTTCGGCAAC
CGCCGCGGCG CGCTGGTGGC GATCGAGCCC GAGACCGGCG ACATCCTCGC CTTCGTCTCC
AAGCCCACCT TCGACCCGAA CCTCTTCATC GAAGGTATCG ACAGCGCCAC CTGGAGCGAG
CTGAACGGCT CGCCCGACAA GCCGCTGCTG AACCGCCCGC TGCGCGGCAC GTATCCGCCG
GGCTCGACCT ACAAGCCGTT CATGGCGCTG GCCGCGCTGG AGCTGGGCAA GCGCACGCCG
CAATGGGGCA TGGCCGATCC CGGCTCGTTC ACGCTGGGCA ACCACACCTT CCGCGACGAC
GTGCCGGGCG GCCACGGCTG GGTCGACATG TACCGCTCCA TCGTGGTGTC GTGCGACACG
TACTACTACA AGCTCGCCAA CGACATGGGC GTCAACGCCA TCCACGATTT CATGAAGCCG
CTCGGCTTCG GCCAGGTCAC CGGCATCGAC ATCGAGGGCG AGCGCACCGG CATCCTGCCC
TCCACCGAGT GGAAGCGCAA AGCCTACAAG CGTCCCGAGC AGCAGAAGTG GTACGACGGC
GAAACCATCT CGCTGGGCAT CGGCCAGGGC TACAACAACT TCACCATCCT CCAGCTGGCG
CATGCGGTGG CGACGCTGGC CAACAACGGC GGCGTGATGA AGCCCCACCT GGTCAAGGCC
GTCGAGGATT CCGTCAACAA GGCCCGCACG CTGACGGTGC CGACCGAGAG CTACCGGATT
CCGCTCAAGC AGGCCAACAT CGACGTGATC AAGCGCGCGA TGGCCGGGGT GGTCCAGGCC
GGCACGGCGG CCAAGGCGTT TGCCGGCGCG CAATATGCCG CGGCGGGCAA GACCGGCACG
GCGCAGGTGT TCTCGCTCGG CAAGGGCGAG AAGTACAACC ACCATGCCAT TCCCGAATAC
AAGCGCGACC ACGCGCTGTT CGAGGCCTTC GCGCCGACCG ACCACCCGAA GATCGCGGTG
GCGCTGATCG TCGAGAACGC GGGCTTCGGC GCCACCTCGG CCGCGCCGAT CGCGCGCGCG
GTGTTCGACT ACTACCTGCA GGGCAAGTGG CCGGCCGAGC TGGCGGCCAT CGCGCCCAAG
GTCCAGCCGC AGCCGCCGGT CGATACGCCG AGCGTGTTCT CCACCGGCAA GACCGCCACC
ATCGCCAGCG CCACGGCCAC GCCGCAGGCA GCCGCGGAGG CGGTGGCGCA GAGCGCGGCC
CTGGCCGCGG CCGCATCCGG CGAGCAGGCT GCCGATGCAG CCACGGTGGG CGGCGCGTCC
GCGCCGGGCG CTTCGGCCGT GGCGGCCGGC GCACCGCGCG CCGCGCCGGC GATGTCGTCC
GATCGGGTCG CGCCCGCGCT GCGCGAGGCC GGCACCAGCG CCCAGGCGGT CGCTCCGGCC
ACGCTGGACG CCCAGGTGCT GCAGGCGCTG TCGCACGTCC AGCCCGCCCC CGACCTGCCG
AGCCCGCGCG GCCGCAACCT GCCGGCGGCA CCGGCTTCCG CGCCGGCCGC CTCGCCCAAG
GACCGCAAGC CCGCGGTCAA GCCCAATCCC AAGCCTGCGC CCAAACCGGC ACGGGCCGCT
CCCTGA
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| Protein sequence | MTEIRNVEQE LSRFRVRLAA AALFVLVCFG LLLVRFFWLQ SVKHEQYSAK AEDNRISVAP
IEPNRGIIMD RNGVVLARNY SAYTLEVTPS KLQDTLDNTI DQLAQVIDIQ PRDRRRFKRL
MEDARSFESL PIRSQLTDQE VARFSAQRFR FPGVDVHARL FRQYPLGEAA AHVIGYIGRI
SERDLERIDD MSEANSQPNV TYDPRKDANN YSGTEYIGKV GIEQSYETEL HGLTGYEEVE
VSAGGRPIRT LSTSQATPGN NLILSLDINL QRLAEQLFGN RRGALVAIEP ETGDILAFVS
KPTFDPNLFI EGIDSATWSE LNGSPDKPLL NRPLRGTYPP GSTYKPFMAL AALELGKRTP
QWGMADPGSF TLGNHTFRDD VPGGHGWVDM YRSIVVSCDT YYYKLANDMG VNAIHDFMKP
LGFGQVTGID IEGERTGILP STEWKRKAYK RPEQQKWYDG ETISLGIGQG YNNFTILQLA
HAVATLANNG GVMKPHLVKA VEDSVNKART LTVPTESYRI PLKQANIDVI KRAMAGVVQA
GTAAKAFAGA QYAAAGKTGT AQVFSLGKGE KYNHHAIPEY KRDHALFEAF APTDHPKIAV
ALIVENAGFG ATSAAPIARA VFDYYLQGKW PAELAAIAPK VQPQPPVDTP SVFSTGKTAT
IASATATPQA AAEAVAQSAA LAAAASGEQA ADAATVGGAS APGASAVAAG APRAAPAMSS
DRVAPALREA GTSAQAVAPA TLDAQVLQAL SHVQPAPDLP SPRGRNLPAA PASAPAASPK
DRKPAVKPNP KPAPKPARAA P
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